PROTEIN: HRGMv2_4189_1_15
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Protein File & Metadata
Source:
HRGMv2_4189_1_15.pdb
Genome ID:
Protein ID:
HRGMv2_4189_1_15
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Protein Sequence
MNSFDLSFLK YLQDNSPLAV DSAVLRFGKT LSTLKRTMKE LNELLPDEAH LHQDNAFITT 60 GITYSDYIQF LQRVRFNRYL TTGEERVQDL FVALCLHDVV NKNEYYKRFY VSAGTVKNDN 120 PLMLNRVQES GLTLLSIPRK GSLLVGDEFS LRLAACMSIL KTVEIGTGHQ LIAHQANEPI 180 NRSIAEQFLH ECAQEITQAA AYYEKVISPV IHLGYNGRKY LLVYLSLALQ RIRRGRLIHD 240 SSAAAFLTTY PYRVLAEKDE NACLDMLIAS LTFTWRPFTL YDARLVGYVK LACEVMSHGL 300 KATIHNHHGW FAEIYHFIYA AIVQNKLRLW FDDKKLHDVQ RRYPDLWLHV QRALREIESR 360 WQMSFSAIHL ATLVLIIKKH ELKNRVVSDV KKRVIIVTNS SESKVGYFKE VLLSRFHIEV 420 LACVNINELD RLQQQDFDLL IAFTNKIASH LRHAQLSYVK VNFYLTQDDF QLLREHGLSP 480 ARKKIPVDAF VQQVQGISPQ ALKTFLEQHY GDVFI 515
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CY59-F1-model_v4 | 1 | 480 | 10 | 475 | 0.6427 |
0.7022 |
| AF-A0A132Z7Y4-F1-model_v4 | 1 | 479 | 13 | 477 | 0.6412 |
0.7062 |
| AF-A0A077ZET5-F1-model_v4 | 1 | 478 | 9 | 489 | 0.6377 |
0.6991 |
| AF-A0A1A7S9Q3-F1-model_v4 | 1 | 480 | 5 | 484 | 0.6321 |
0.6847 |
| AF-A0A133CSJ7-F1-model_v4 | 1 | 480 | 10 | 482 | 0.6304 |
0.6919 |
| AF-Q8DP24-F1-model_v4 | 1 | 478 | 14 | 498 | 0.6259 |
0.6856 |
| AF-A0A077ZBF5-F1-model_v4 | 2 | 479 | 8 | 494 | 0.6257 |
0.6851 |
| AF-A0A132PBA0-F1-model_v4 | 4 | 475 | 1 | 463 | 0.6129 |
0.6682 |
| AF-Q8DNA0-F1-model_v4 | 1 | 393 | 3 | 418 | 0.6081 |
0.8247 |
| AF-A0A1A7UA23-F1-model_v4 | 1 | 478 | 35 | 521 | 0.6049 |
0.6767 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3sqn-assembly1.cif.gz_A | 1 | 480 | 13 | 466 | 0.6252 |
0.6973 |
| 5way-assembly1.cif.gz_B | 2 | 478 | 6 | 477 | 0.6007 |
0.6498 |
| 5way-assembly1.cif.gz_A | 2 | 479 | 6 | 482 | 0.5896 |
0.6367 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q44636-F1-model_v4 | 1 | 477 | 8 | 475 | 0.6957 |
0.7536 |
| AF-Q44643-F1-model_v4 | 1 | 479 | 4 | 483 | 0.6032 |
0.649 |
| AF-Q97P44-F1-model_v4 | 2 | 478 | 6 | 492 | 0.5963 |
0.6502 |
| AF-Q9RMX9-F1-model_v4 | 1 | 513 | 4 | 425 | 0.5816 |
0.6962 |
| AF-P46321-F1-model_v4 | 1 | 479 | 10 | 492 | 0.5778 |
0.6957 |
| AF-O31644-F1-model_v4 | 1 | 479 | 1 | 496 | 0.5724 |
0.6931 |
| AF-P32152-F1-model_v4 | 1 | 477 | 1 | 436 | 0.5209 |
0.6556 |
| AF-Q02425-F1-model_v4 | 1 | 514 | 2 | 649 | 0.4989 |
0.5715 |