PROTEIN: HRGMv2_4189_19_17
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Protein File & Metadata
Source:
HRGMv2_4189_19_17.pdb
Genome ID:
Protein ID:
HRGMv2_4189_19_17
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Protein Sequence
MSRSIRVCSY LLLPLIYLLV NVKLAQLGES FPITIVTFLP LLLLLFVERI NLKKLMIALG 60 LGVGLTLFNY LFGQSLDPSK YVTSTMLFVY IVIIIGMVWS IRFKTISPHN HRKILRFFYV 120 VITLVVALAA LEMAQIILTG GSSLIATISK YLIYSNSYVL NFIKFGGKRT TALYFEPAFF 180 ALALISIWLC IKQFGIKTPK SDAMILAGII LSGSFSGVMT FILFYLLEWA FQYLNKEAIK 240 KKLPLAIISL GAFFIGLVFA FPYIAERIGD LGTEGSSSYY RIIGPLVMVG YSLTSIDGVV 300 RFGSLYEYVA SFGIFNGADV GKTIDNGLYL LMIYFSWFAV ILTAGYLYYV FKMFINAFGN 360 NRNFAVQLYL FTPISLFFTG SIFSPEYAFL IVCPFILRKA LNIADSR 407
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 406 | 1 | 405 | 0.9723 |
0.9807 |
| AF-H9L488-F1-model_v4 | 1 | 404 | 1 | 404 | 0.9706 |
0.9802 |
| AF-Q2G288-F1-model_v4 | 1 | 407 | 2 | 410 | 0.6995 |
0.7307 |
| AF-Q9I1M9-F1-model_v4 | 4 | 407 | 42 | 455 | 0.6733 |
0.7527 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 2 | 407 | 19 | 448 | 0.5614 |
0.7367 |
| UII34295.1 | GT4 | 1 | 407 | 7 | 419 | 0.5529 |
0.7332 |
| AF-E6U9X7-F1-model_v4 | GT0 | 1 | 407 | 2 | 493 | 0.5468 |
0.7295 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517MXC4 | GT26 | 2 | 407 | 19 | 448 | 0.5614 |
0.7367 |
| UII34295.1 | GT4 | 1 | 407 | 7 | 419 | 0.5529 |
0.7332 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 406 | 1 | 405 | 0.9723 |
0.9807 |
| AF-Q00474-F1-model_v4 | 26 | 403 | 1 | 392 | 0.6329 |
0.6952 |