PROTEIN: HRGMv2_4162_34_37
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Protein File & Metadata
Source:
HRGMv2_4162_34_37.pdb
Genome ID:
Protein ID:
HRGMv2_4162_34_37
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Protein Sequence
MSRSIRICSY LLLPLIYLLV NVKIAQLGES FPITIVTFLP VLLLLYVDKI SIKKLMIALG 60 LGAGLTAFNY IFGQSLDASK YVTSTMLFVY IVIIIGMVWS IRFKTISPHN YRKILRFFYL 120 AVTLIVVLAA MEMAQIILTG GSSLMEIISK YLIYSNSYVL NFIKFGGKRT TALYFEPAFF 180 ALALISIWLS IKQFGIKTPK ADAMILAGIV LSGSFSGVMT FILFYLLEWA FQYLNKEAIK 240 KKLPLAIISL TVFLVGIVFA FPYIATRLGD LGTEGSSSYY RIIGPLVMVG YSLTHIDGVV 300 RFGSLYEYVA SFGIFNGADV GKTIDNGLYL LIIYFSWFAV LLTAWYLFKV FKMMINAFGD 360 NQNFRVQLYL FTPVSLFFTG SIFSPEYAFL IVCPFILRKA LNITRI 406
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-H9L488-F1-model_v4 | 1 | 404 | 1 | 404 | 0.9668 |
0.9761 |
| AF-P71238-F1-model_v4 | 1 | 405 | 1 | 405 | 0.9658 |
0.9742 |
| AF-Q9I1M9-F1-model_v4 | 4 | 406 | 42 | 453 | 0.6692 |
0.749 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B5YD26-F1-model_v4 | GT9 | 1 | 406 | 39 | 584 | 0.5672 |
0.7525 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 1 | 406 | 18 | 448 | 0.5631 |
0.738 |
| AF-E6U9X7-F1-model_v4 | GT0 | 1 | 406 | 5 | 423 | 0.5427 |
0.7245 |
| AF-A0A386XPQ4-F1-model_v4 | GT0 | 1 | 406 | 32 | 450 | 0.5371 |
0.7249 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B5YD26 | GT9 | 1 | 406 | 39 | 584 | 0.5672 |
0.7525 |
| A0A517MXC4 | GT26 | 1 | 406 | 18 | 448 | 0.5631 |
0.738 |
| UII34295.1 | GT4 | 1 | 406 | 9 | 419 | 0.5473 |
0.7266 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71238-F1-model_v4 | 1 | 405 | 1 | 405 | 0.9658 |
0.9742 |
| AF-O32270-F1-model_v4 | 1 | 406 | 3 | 484 | 0.6498 |
0.7267 |