PROTEIN: HRGMv2_4153_80_3
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Protein File & Metadata
Source:
HRGMv2_4153_80_3.pdb
Genome ID:
Protein ID:
HRGMv2_4153_80_3
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Protein Sequence
MREDIARLLK YAPPEMRAAV LGLLPAAKRT LDSGYHPEVR RVPLKSWRCL LQLLASVTSM 60 QSDTETLLRV SNDLLSIADR MAPPGEVLRQ SAEVLVHALH ADLYVCRLRN AKGEWVTQAA 120 NHVRGESIPI VAPMLDESLR KHPVMSAVLE GHVRYVVSNN LQGLERGGGS FDCVVYKEGY 180 RSRLAFVLRE RNDRPAFGLV QLYTKREYGF EAYDERFLSK CARIVSLTVG RRVAVARDTL 240 EKAAGAMAHY GNNALNVMRN QAEYCGELVE DIDANLTRAL RISRELLAEF PDDSRGRFLA 300 LELESILARA DLTELAGHLG GVLEGTRRMT RIINSLKKSA ERPRLMHYAL GHDVLKLEDD 360 IRHED 365
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EW90-F1-model_v4 | 64 | 327 | 1 | 224 | 0.5715 |
0.7576 |
| AF-K0ESL1-F1-model_v4 | 9 | 365 | 73 | 579 | 0.5109 |
0.6504 |
| AF-K0EXH3-F1-model_v4 | 15 | 365 | 79 | 482 | 0.5046 |
0.6532 |
| AF-X8FCF0-F1-model_v4 | 1 | 365 | 110 | 560 | 0.496 |
0.6105 |
| AF-P0AA93-F1-model_v4 | 4 | 332 | 14 | 522 | 0.437 |
0.5889 |
| AF-A0A0H3GWF4-F1-model_v4 | 5 | 331 | 9 | 512 | 0.4319 |
0.5838 |
| AF-Q32DG2-F1-model_v4 | 4 | 331 | 14 | 521 | 0.4284 |
0.5786 |
| AF-A0A0H3GS71-F1-model_v4 | 1 | 303 | 46 | 510 | 0.423 |
0.6544 |
| AF-A0A077ZJ24-F1-model_v4 | 62 | 365 | 1 | 274 | 0.4158 |
0.6238 |
| AF-A0A0K0DWG2-F1-model_v4 | 34 | 268 | 193 | 425 | 0.3653 |
0.7297 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A518DNM5-F1-model_v4 | GT35 | 24 | 316 | 1 | 873 | 0.3549 |
0.6115 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6oap-assembly1.cif.gz_B | 8 | 242 | 19 | 303 | 0.4915 |
0.6864 |
| 6oaq-assembly1.cif.gz_B | 9 | 241 | 19 | 301 | 0.4906 |
0.6909 |
| 3c2w-assembly1.cif.gz_F | 37 | 365 | 62 | 370 | 0.4695 |
0.6234 |
| 3nhq-assembly1.cif.gz_A | 37 | 365 | 62 | 372 | 0.4693 |
0.6232 |
| 6tl4-assembly1.cif.gz_A | 37 | 361 | 76 | 478 | 0.4692 |
0.6094 |
| 3c2w-assembly1.cif.gz_E | 38 | 365 | 62 | 370 | 0.4682 |
0.6234 |
| 6ptx-assembly1.cif.gz_A | 38 | 359 | 62 | 470 | 0.4681 |
0.6039 |
| 3nhq-assembly1.cif.gz_B | 37 | 365 | 62 | 372 | 0.4673 |
0.6171 |
| 6r27-assembly2.cif.gz_D | 39 | 359 | 49 | 444 | 0.4672 |
0.5966 |
| 3nhq-assembly2.cif.gz_D | 37 | 361 | 61 | 466 | 0.4669 |
0.5991 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O07527-F1-model_v4 | 33 | 365 | 1 | 319 | 0.5437 |
0.6461 |
| AF-P0AA94-F1-model_v4 | 5 | 335 | 15 | 525 | 0.4393 |
0.59 |
| AF-P0AA93-F1-model_v4 | 4 | 332 | 14 | 522 | 0.437 |
0.5889 |
| AF-A0A0H2XCS3-F1-model_v4 | 31 | 361 | 71 | 497 | 0.4332 |
0.6059 |
| AF-P27713-F1-model_v4 | 26 | 329 | 1 | 383 | 0.4324 |
0.6148 |
| AF-P0AD16-F1-model_v4 | 6 | 334 | 14 | 525 | 0.4174 |
0.5613 |
| AF-A7ZQD8-F1-model_v4 | 62 | 365 | 1 | 274 | 0.4069 |
0.6218 |
| AF-A8GG93-F1-model_v4 | 62 | 365 | 1 | 275 | 0.4066 |
0.6211 |
| AF-A4WDR5-F1-model_v4 | 62 | 365 | 1 | 274 | 0.4065 |
0.6211 |
| AF-B1XCN6-F1-model_v4 | 62 | 365 | 1 | 274 | 0.4063 |
0.62 |