PROTEIN: HRGMv2_4147_15_28
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4147_15_28.pdb
Genome ID:
Protein ID:
HRGMv2_4147_15_28
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MPSLAKLLET RCFHGVVLVA GFAFVLTGAF HGNVWFDESY SVAIANHSFA EIWDIGSGDV 60 HPVLFYWALH VLNLVFGQNV TVYRLFAALG ALALAWLGYS IVRRDFGWRA GLLFSFLCLF 120 MPYMAYESVE IRMYSWATFT VTVCALFAWR IACVLKGGAM VDAGQQNEGW WTRIASAAAS 180 SKVPRWAGVP FHWWLIFFAS SVASAYLHYY GAIAAFLVNV FLLAFMVARL HSRKALLVLL 240 AGAAVQLALY APWLAVVANQ VGVVSGSYWA EVQFPRTFVE WAFYPLVTSY VVFADTYGAF 300 YVVALGACAA LAIVSGMGLL VRRLRSRKEL AQSDAATAVS LKRERTSSSD RLPMAWGLAL 360 YVSVFAVALA ASVAMDSLIV YYRYLSVALG PLILSLSLLV SRFKSTCCVA GLLAAFLGTA 420 CISQSLFVQD AYNSKNEEPL SYFEEVAGQG DGPLVLSSDI GIEGVTAVSC SDVNQVFLAW 480 QEGNWAKAYQ CYSPTLTCID SWDQALSSYQ GEFVVLGQTN KEAVPVDVTD LEARPDVALV 540 SSKTFYRPYE RTWFTVAIME KE 562
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZP99-F1-model_v4 | 5 | 562 | 14 | 508 | 0.7556 |
0.8318 |
| AF-Q9HUZ2-F1-model_v4 | 3 | 562 | 1 | 476 | 0.7197 |
0.7956 |
| AF-Q9CC27-F1-model_v4 | 9 | 561 | 28 | 527 | 0.7033 |
0.7798 |
| AF-O06152-F1-model_v4 | 9 | 561 | 56 | 556 | 0.6874 |
0.7791 |
| AF-Q32DT1-F1-model_v4 | 1 | 562 | 1 | 550 | 0.6722 |
0.6969 |
| AF-P76473-F1-model_v4 | 2 | 562 | 1 | 550 | 0.6717 |
0.6962 |
| AF-K0F7B2-F1-model_v4 | 9 | 562 | 10 | 479 | 0.6714 |
0.7652 |
| AF-O52327-F1-model_v4 | 1 | 562 | 1 | 547 | 0.671 |
0.6975 |
| AF-A0A0H3GZQ8-F1-model_v4 | 2 | 562 | 1 | 551 | 0.6706 |
0.6949 |
| AF-Q656F1-F1-model_v4 | 1 | 561 | 31 | 551 | 0.6605 |
0.722 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-E4NCG6-F1-model_v4 | GT83 | 11 | 562 | 1 | 470 | 0.7642 |
0.8454 |
| AF-A0A2H5AZW5-F1-model_v4 | GT83 | 10 | 562 | 1 | 472 | 0.7586 |
0.8392 |
| AF-A0A6P1J975-F1-model_v4 | GT83 | 1 | 562 | 1 | 482 | 0.7585 |
0.8317 |
| A0A919H1R8 | GT83 | 7 | 562 | 1 | 484 | 0.7582 |
0.8309 |
| AF-A0A1Z2KV33-F1-model_v4 | GT83 | 11 | 560 | 1 | 473 | 0.7575 |
0.8364 |
| AF-A0A3T0SXA0-F1-model_v4 | GT83 | 1 | 562 | 5 | 494 | 0.7558 |
0.8262 |
| A0A0D5CKI4 | GT83 | 11 | 561 | 1 | 476 | 0.7547 |
0.8317 |
| AF-A0A0D5CKI4-F1-model_v4 | GT83 | 11 | 561 | 1 | 476 | 0.7547 |
0.8317 |
| AF-A0A7H8KST0-F1-model_v4 | GT83 | 6 | 561 | 2 | 477 | 0.7544 |
0.8316 |
| AF-A0A7D3ZKU3-F1-model_v4 | GT83 | 15 | 560 | 1 | 460 | 0.7536 |
0.8415 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A543NUS7 | GT83 | 11 | 560 | 1 | 475 | 0.7589 |
0.8366 |
| A0A919H1R8 | GT83 | 7 | 562 | 1 | 484 | 0.7582 |
0.8309 |
| A0A0D5CKI4 | GT83 | 11 | 561 | 1 | 476 | 0.7547 |
0.8317 |
| A0A7D3ZKU3 | GT83 | 15 | 560 | 1 | 460 | 0.7536 |
0.8415 |
| A0A3S9W690 | GT83 | 1 | 561 | 1 | 511 | 0.7502 |
0.8037 |
| A0A387BP67 | GT83 | 7 | 562 | 1 | 476 | 0.7486 |
0.826 |
| Q1IJH5 | GT83 | 9 | 562 | 15 | 483 | 0.7474 |
0.8386 |
| A0A3T1AZA5 | GT83 | 6 | 562 | 14 | 485 | 0.7436 |
0.8319 |
| BCY11543.1 | GT83 | 2 | 562 | 2 | 473 | 0.7431 |
0.8265 |
| UFS57809.1 | GT83 | 9 | 562 | 14 | 481 | 0.7427 |
0.8351 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ezm-assembly1.cif.gz_A | 1 | 562 | 1 | 531 | 0.6723 |
0.7118 |
| 5f15-assembly1.cif.gz_A | 2 | 562 | 1 | 535 | 0.6678 |
0.7048 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67601-F1-model_v4 | 10 | 560 | 1 | 416 | 0.6996 |
0.8162 |
| AF-B4EUL1-F1-model_v4 | 1 | 560 | 1 | 548 | 0.688 |
0.7132 |
| AF-A8FRR0-F1-model_v4 | 2 | 562 | 1 | 546 | 0.6867 |
0.713 |
| AF-Q7N3Q9-F1-model_v4 | 1 | 562 | 1 | 552 | 0.6824 |
0.7057 |
| AF-A1JPM4-F1-model_v4 | 5 | 562 | 1 | 553 | 0.6806 |
0.7032 |
| AF-Q8D339-F1-model_v4 | 1 | 562 | 3 | 562 | 0.6799 |
0.6992 |
| AF-Q6D2F3-F1-model_v4 | 1 | 562 | 1 | 554 | 0.6792 |
0.7018 |
| AF-B2K5L1-F1-model_v4 | 4 | 562 | 1 | 553 | 0.6786 |
0.7015 |
| AF-C6DAW3-F1-model_v4 | 2 | 562 | 1 | 554 | 0.6786 |
0.7013 |
| AF-Q1CIH9-F1-model_v4 | 1 | 562 | 1 | 553 | 0.6784 |
0.7012 |