PROTEIN: HRGMv2_4124_110_4
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Protein File & Metadata
Source:
HRGMv2_4124_110_4.pdb
Genome ID:
Protein ID:
HRGMv2_4124_110_4
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Protein Sequence
MDNAREVKAS RPAAPGASAS EQRARTIARI ALVLAIIAQA VLCCWLAFNK VGLFQDESYT 60 FLLANESWLD AVPEEGVVYQ DGEPWQSWAS VEQFLGINPD KLYENQATDN HPPLYYTLFS 120 LAYSLFPGAT TPVIGVMVNA VFALAGTVLL YFLCRALRAP RSLSVALCAV WAVNAGMANS 180 TVYLRMYCLL SVFFTAAALV SVRHLNASRS GIPLLVATFA TTACGFLTQY FFVLFAFPLY 240 LMTGIALLAR RRIACAAKFA VATLGGIACG MLAFPPSVSH LFSSSRGQGA LERAATGDSF 300 WSFLVEDWRL LNDGIFGGLL PVLLVALCVL AAVALFMRTT GRRQSVREIG GGAPGLSARG 360 HASLERPERA QDGIFVPAVV MLFVSSVVFV ALVARVAPYA SIRYLMAVDQ ILLISVLLLI 420 VVAVRALFPS ARAAHAVVLV IAVGIVLTLT GWAHGIKYLD QETDSVAALY DQNEAMVVVS 480 EDVLLQQSVM PDALAYGTSV YFYHENAFDA FDFAQLGQDI SLYVQPGLDA APYLEELSGY 540 SNASYEHVGR TIDNYDVYDV TL 562
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CC27-F1-model_v4 | 9 | 562 | 9 | 526 | 0.7019 |
0.7537 |
| AF-Q8ZP99-F1-model_v4 | 19 | 562 | 11 | 506 | 0.694 |
0.7648 |
| AF-Q9HUZ2-F1-model_v4 | 20 | 562 | 1 | 474 | 0.6869 |
0.7654 |
| AF-O06152-F1-model_v4 | 12 | 562 | 43 | 556 | 0.6857 |
0.7597 |
| AF-A0A0K0DXE0-F1-model_v4 | 29 | 562 | 1 | 492 | 0.6655 |
0.7253 |
| AF-A0A5K4FC45-F1-model_v4 | 27 | 562 | 1 | 518 | 0.6586 |
0.7053 |
| AF-Q5AK24-F1-model_v4 | 20 | 562 | 1 | 482 | 0.6483 |
0.7139 |
| AF-A0A0R0GSP5-F1-model_v4 | 11 | 562 | 22 | 541 | 0.6482 |
0.7048 |
| AF-Q54PM5-F1-model_v4 | 26 | 562 | 7 | 547 | 0.6465 |
0.6848 |
| AF-A0A0K0EAE5-F1-model_v4 | 29 | 562 | 1 | 490 | 0.6452 |
0.709 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1B1BQ47-F1-model_v4 | GT83 | 12 | 562 | 3 | 504 | 0.7278 |
0.7925 |
| AF-A0A2R2WBG4-F1-model_v4 | GT83 | 24 | 562 | 1 | 486 | 0.7188 |
0.7898 |
| AF-A0A3G8VNE0-F1-model_v4 | GT83 | 20 | 562 | 16 | 504 | 0.7156 |
0.7937 |
| AF-A0A1S7B5G9-F1-model_v4 | GT83 | 20 | 562 | 16 | 504 | 0.7141 |
0.7922 |
| AF-A0A2K9DF52-F1-model_v4 | GT83 | 17 | 562 | 17 | 508 | 0.7122 |
0.7895 |
| AF-A0A126Z0J0-F1-model_v4 | GT83 | 13 | 562 | 17 | 527 | 0.7119 |
0.7746 |
| AF-A0A387BN82-F1-model_v4 | GT83 | 22 | 562 | 20 | 507 | 0.7099 |
0.7936 |
| A0A7I0E4J1 | GT83 | 14 | 562 | 13 | 514 | 0.7088 |
0.7771 |
| AF-A0A2H5B4C4-F1-model_v4 | GT83 | 20 | 562 | 2 | 485 | 0.7058 |
0.7774 |
| AF-A0A2L0N2L3-F1-model_v4 | GT83 | 15 | 562 | 3 | 509 | 0.7045 |
0.7614 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5B8M0H5 | GT83 | 9 | 562 | 11 | 509 | 0.7297 |
0.7967 |
| H6MRT8 | GT83 | 12 | 562 | 1 | 505 | 0.7288 |
0.7862 |
| A0A7T4WKG0 | GT83 | 17 | 562 | 6 | 487 | 0.7279 |
0.8037 |
| A0A1B1BQ47 | GT83 | 12 | 562 | 3 | 504 | 0.7278 |
0.7925 |
| UCR88156.1 | GT83 | 18 | 562 | 3 | 496 | 0.7257 |
0.7926 |
| A0A3S9W690 | GT83 | 17 | 562 | 3 | 510 | 0.7249 |
0.7791 |
| A0A0F0L4U4 | GT83 | 14 | 562 | 1 | 489 | 0.7219 |
0.789 |
| A0A4P6EGC6 | GT83 | 19 | 562 | 11 | 486 | 0.718 |
0.803 |
| A0A919H1R8 | GT83 | 26 | 562 | 1 | 481 | 0.7163 |
0.7898 |
| A0A3G8VNE0 | GT83 | 20 | 562 | 16 | 504 | 0.7156 |
0.7937 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5f15-assembly1.cif.gz_A | 23 | 562 | 1 | 541 | 0.6217 |
0.6547 |
| 6s7o-assembly1.cif.gz_A | 18 | 562 | 3 | 641 | 0.5836 |
0.66 |
| 7oci-assembly1.cif.gz_F | 17 | 562 | 1 | 600 | 0.5732 |
0.6408 |
| 8b6l-assembly1.cif.gz_I | 19 | 562 | 1 | 670 | 0.5729 |
0.6601 |
| 8age-assembly1.cif.gz_A | 17 | 560 | 1 | 607 | 0.5704 |
0.641 |
| 8agc-assembly1.cif.gz_A | 17 | 562 | 1 | 658 | 0.5703 |
0.6598 |
| 6ezn-assembly1.cif.gz_F | 17 | 562 | 1 | 613 | 0.5678 |
0.6383 |
| 6ftg-assembly1.cif.gz_5 | 17 | 561 | 8 | 641 | 0.5677 |
0.6377 |
| 7zli-assembly1.cif.gz_A | 16 | 558 | 1 | 658 | 0.5675 |
0.6467 |
| 6s7t-assembly1.cif.gz_A | 18 | 560 | 1 | 661 | 0.561 |
0.6553 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67601-F1-model_v4 | 28 | 562 | 1 | 416 | 0.6796 |
0.7945 |
| AF-Q1MLH5-F1-model_v4 | 27 | 559 | 1 | 463 | 0.6512 |
0.7362 |
| AF-Q5AK24-F1-model_v4 | 20 | 562 | 1 | 482 | 0.6483 |
0.7139 |
| AF-O67270-F1-model_v4 | 26 | 562 | 1 | 496 | 0.646 |
0.7044 |
| AF-Q7SXZ1-F1-model_v4 | 15 | 562 | 24 | 525 | 0.6415 |
0.7141 |
| AF-Q7N3Q9-F1-model_v4 | 22 | 562 | 1 | 550 | 0.641 |
0.6781 |
| AF-Q9USN0-F1-model_v4 | 29 | 562 | 1 | 506 | 0.6384 |
0.6889 |
| AF-Q4IB63-F1-model_v4 | 14 | 562 | 2 | 602 | 0.6376 |
0.6967 |
| AF-Q6BH65-F1-model_v4 | 19 | 562 | 30 | 549 | 0.6375 |
0.6965 |
| AF-A8FRR0-F1-model_v4 | 23 | 562 | 3 | 545 | 0.6371 |
0.6713 |