PROTEIN: HRGMv2_4121_10_57
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Protein File & Metadata
Source:
HRGMv2_4121_10_57.pdb
Genome ID:
Protein ID:
HRGMv2_4121_10_57
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Protein Sequence
MGSILDLTLS EVLWLAGFNV LLFELPIQNF TGFSYIDEFM AVCLLGVAVK DSIKREKETS 60 KLNAAVYAAM FLLVIVVCLG LLGNITWEVQ TQAAPILIDI FTCIKFPLTV ISGSMVFSKS 120 SDIFFGVIEM EAKVVVAVLF VLGVANLFVD YGMGADLRYG LRSFMAVFGH PTYLVFACVG 180 LSVILLANWK HNLSWIIVAL VVISLSLRSK GLVYAAIVVA LLVLFSRRNK ISILQVVVCA 240 FLAFFIAYDQ FVAYFQTNGF ARTELLQTAF EVANDHAPYG SGFATYGSAV TADLQYYSSL 300 YYEYGLSTVW GLSPDWPAFL SDTFWPTVLG QFGWMGVLCY AGVVGLLFRF AYQFASGTRL 360 AACCCFLYLL ISSTSESAFF NPQSVYLAVC LSIVLGSGLR ANQKERFRKC NR 412
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O25682-F1-model_v4 | 5 | 405 | 8 | 429 | 0.6518 |
0.7056 |
| AF-P27243-F1-model_v4 | 7 | 406 | 19 | 419 | 0.6468 |
0.6948 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q4JZZ9-F1-model_v4 | GT4 | 1 | 403 | 1 | 405 | 0.6431 |
0.68 |
| AF-A0A212QE91-F1-model_v4 | GT2 | 4 | 412 | 2 | 508 | 0.5862 |
0.7388 |
| AF-M1FGR5-F1-model_v4 | GT2 | 5 | 412 | 4 | 513 | 0.5831 |
0.7385 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 4 | 412 | 2 | 508 | 0.5822 |
0.734 |
| AF-E4PMS8-F1-model_v4 | GT2 | 4 | 412 | 2 | 512 | 0.5807 |
0.7321 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 6 | 412 | 1 | 511 | 0.5803 |
0.734 |
| AF-A0A346S464-F1-model_v4 | GT2 | 4 | 412 | 2 | 512 | 0.5769 |
0.7277 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 8 | 412 | 1 | 507 | 0.5766 |
0.7316 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 4 | 412 | 5 | 514 | 0.5764 |
0.7272 |
| QSP96058.1 | GT2 | 6 | 412 | 7 | 518 | 0.5699 |
0.7236 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 1 | 403 | 1 | 405 | 0.6431 |
0.68 |
| QSP96058.1 | GT2 | 6 | 412 | 7 | 518 | 0.5699 |
0.7236 |
| WBY01952.1 | GT9 | 1 | 411 | 5 | 561 | 0.5426 |
0.714 |
| B5YD26 | GT9 | 7 | 412 | 42 | 587 | 0.5408 |
0.7233 |
| A0A517MXC4 | GT26 | 6 | 410 | 18 | 452 | 0.537 |
0.71 |
| D9S8K7 | GT4 | 7 | 412 | 13 | 785 | 0.5158 |
0.692 |
| UII34295.1 | GT4 | 5 | 409 | 14 | 423 | 0.505 |
0.6762 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 6 | 412 | 1 | 382 | 0.6779 |
0.7298 |
| AF-P27243-F1-model_v4 | 7 | 406 | 19 | 419 | 0.6468 |
0.6948 |
| AF-Q00474-F1-model_v4 | 29 | 408 | 3 | 398 | 0.6424 |
0.7048 |
| AF-Q3IG03-F1-model_v4 | 57 | 412 | 23 | 395 | 0.5386 |
0.6272 |