PROTEIN: HRGMv2_4099_173_6
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Protein File & Metadata
Source:
HRGMv2_4099_173_6.pdb
Genome ID:
Protein ID:
HRGMv2_4099_173_6
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Protein Sequence
METEEKKEKK NKKKKSDKIE VSVKHKTLRI VCFVIVTVIA IVSFSIGISQ WVKKEPGYYD 60 IKAAADDLVP GYANGITLTC YFDGKSDEIR VKNNNATTAY SNGLKWIYCM VDAETNYDGY 120 NNIAMLNQHM GEDISVSSEL FNILTDAYEF TCKGTGYNMF AGLLAQEWNS ILYLDDPSEV 180 DPLNDPYEAE RLEKLAEATA NLDNFSFEIV DEAKHTVCFN ISQEYRQLIE DLELEGPVLD 240 LNIMREAFIL RYLTRTLNDA GVTTGFVATD SGLTCTLSES SEAAFLMYGR AEDGSVQYCA 300 GIASQPGAAL CQFTSYAIDS EAGGYYELET EGGTLLRHPH FNLLTAEMNE FLLNASTVSY 360 SGDIVEACLR CIEMYSCKDA ESLRQLIAAI PDGDTNSSYI LAAAPYIVNT SHSRASMLSS 420 AEDTEYVIEI VK 432
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132Z905-F1-model_v4 | 55 | 432 | 40 | 364 | 0.6872 |
0.8472 |
| AF-Q5F6X3-F1-model_v4 | 55 | 419 | 31 | 351 | 0.6761 |
0.8262 |
| AF-Q4CQU6-F1-model_v4 | 54 | 422 | 36 | 373 | 0.531 |
0.7722 |
| AF-A4IB12-F1-model_v4 | 55 | 432 | 40 | 970 | 0.4363 |
0.7179 |
| AF-A4IAY0-F1-model_v4 | 55 | 432 | 55 | 1022 | 0.4332 |
0.7206 |
| AF-Q4CMU8-F1-model_v4 | 54 | 432 | 36 | 965 | 0.4318 |
0.7067 |
| AF-Q57W38-F1-model_v4 | 55 | 432 | 38 | 965 | 0.431 |
0.708 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WED65993.1 | GT2 | 56 | 428 | 13 | 372 | 0.5098 |
0.6871 |
| AF-A0A5B9W6L9-F1-model_v4 | GH171 | 51 | 423 | 16 | 342 | 0.4429 |
0.8306 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WED65993.1 | GT2 | 56 | 428 | 13 | 372 | 0.5098 |
0.6871 |
| A0A5B9W6L9 | GH171 | 51 | 423 | 16 | 342 | 0.4429 |
0.8306 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ifw-assembly1.cif.gz_A | 55 | 430 | 1 | 327 | 0.7299 |
0.8453 |
| 4ifx-assembly1.cif.gz_A | 55 | 430 | 2 | 330 | 0.7283 |
0.8428 |
| 4xdu-assembly1.cif.gz_A | 55 | 430 | 2 | 330 | 0.7283 |
0.8427 |
| 4xdr-assembly1.cif.gz_A | 55 | 430 | 3 | 329 | 0.7279 |
0.8457 |
| 7f2u-assembly2.cif.gz_B | 55 | 431 | 3 | 321 | 0.7271 |
0.8534 |
| 7f39-assembly1.cif.gz_A | 55 | 430 | 3 | 322 | 0.7245 |
0.8494 |
| 7esb-assembly1.cif.gz_A | 55 | 429 | 2 | 316 | 0.723 |
0.852 |
| 7mgt-assembly1.cif.gz_A | 55 | 430 | 2 | 319 | 0.7214 |
0.8463 |
| 1vrm-assembly1.cif.gz_A | 56 | 419 | 1 | 308 | 0.7141 |
0.8495 |
| 4xgw-assembly2.cif.gz_B | 55 | 419 | 1 | 308 | 0.6994 |
0.8322 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q89AP6-F1-model_v4 | 55 | 420 | 26 | 341 | 0.6804 |
0.8311 |
| AF-O84080-F1-model_v4 | 55 | 406 | 23 | 316 | 0.6598 |
0.8285 |
| AF-Q52718-F1-model_v4 | 23 | 432 | 46 | 510 | 0.5929 |
0.693 |