PROTEIN: HRGMv2_4066_18_7
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4066_18_7.pdb
Genome ID:
Protein ID:
HRGMv2_4066_18_7
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MYYAIIIVAV IMFGANFALQ DVYQKMRGDS LKVSLQATVI GSFASFIVML IINKFKFEYT 60 HFTLLIAIIM SLVNIGFTFF SFKALNYINI SLYSLFSMLG GMLLPFLQGV FFYDEEFTVA 120 KAGCVLFIVI ALILTINRDG NNKGNPIYYI GVFILNGLSG VINKIFISSP LEKTSSAGLN 180 MWIAITSIVI ALLLLMFFLK IKTEKPITLL NSGVIAASGT VSRIANFLLV IALMHLDASV 240 QYPMVTGGVM IVSTIICFFG KKKPSVKEML SVAFAFLGML MLIVIPI 287
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GYQ5-F1-model_v4 | 1 | 287 | 1 | 290 | 0.8285 |
0.8652 |
| AF-P29370-F1-model_v4 | 1 | 287 | 4 | 281 | 0.8231 |
0.8726 |
| AF-Q8ZK79-F1-model_v4 | 1 | 287 | 15 | 308 | 0.8229 |
0.8736 |
| AF-Q9I214-F1-model_v4 | 1 | 287 | 3 | 292 | 0.8203 |
0.8569 |
| AF-O30646-F1-model_v4 | 1 | 287 | 4 | 291 | 0.8185 |
0.8639 |
| AF-Q9HZ18-F1-model_v4 | 1 | 287 | 4 | 284 | 0.8164 |
0.8702 |
| AF-Q9I6P9-F1-model_v4 | 1 | 287 | 16 | 292 | 0.816 |
0.874 |
| AF-Q0P881-F1-model_v4 | 1 | 287 | 5 | 297 | 0.8137 |
0.8523 |
| AF-K0F9Z5-F1-model_v4 | 1 | 287 | 1 | 279 | 0.813 |
0.8657 |
| AF-Q9HWB3-F1-model_v4 | 1 | 287 | 1 | 287 | 0.8129 |
0.8488 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 287 | 450 | 770 | 0.5641 |
0.8351 |
| WJH36882.1 | GH36 | 1 | 287 | 375 | 669 | 0.5463 |
0.7794 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 287 | 98 | 393 | 0.5263 |
0.8187 |
| AF-Q5B3N6-F1-model_v4 | GT25 | 1 | 287 | 516 | 802 | 0.5219 |
0.777 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 1 | 287 | 819 | 1113 | 0.4616 |
0.743 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3P6AF83 | GH28 | 1 | 287 | 450 | 770 | 0.5641 |
0.8351 |
| WJH36882.1 | GH36 | 1 | 287 | 375 | 669 | 0.5463 |
0.7794 |
| A0A4D6KI88 | GH1 | 1 | 287 | 98 | 393 | 0.5263 |
0.8187 |
| Q5B3N6 | GT25 | 1 | 287 | 516 | 802 | 0.5219 |
0.777 |
| A0A7H8KSK8 | GT51 | 1 | 287 | 819 | 1113 | 0.4616 |
0.743 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7b0k-assembly1.cif.gz_A | 2 | 284 | 1 | 255 | 0.7547 |
0.8272 |
| 7paf-assembly1.cif.gz_D | 2 | 283 | 1 | 278 | 0.753 |
0.7947 |
| 5y79-assembly1.cif.gz_B | 1 | 287 | 8 | 304 | 0.7459 |
0.7996 |
| 5i20-assembly2.cif.gz_B | 1 | 287 | 3 | 278 | 0.7148 |
0.7642 |
| 5i20-assembly1.cif.gz_A | 1 | 287 | 3 | 283 | 0.712 |
0.7587 |
| 5i20-assembly5.cif.gz_E | 1 | 287 | 3 | 285 | 0.7062 |
0.7519 |
| 6oh3-assembly1.cif.gz_A | 1 | 287 | 1 | 304 | 0.7013 |
0.75 |
| 6xbo-assembly1.cif.gz_A | 1 | 287 | 1 | 309 | 0.6859 |
0.7483 |
| 6oh4-assembly2.cif.gz_B | 4 | 287 | 1 | 298 | 0.6856 |
0.7347 |
| 6i1r-assembly1.cif.gz_A | 1 | 287 | 1 | 304 | 0.6661 |
0.7226 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92F91-F1-model_v4 | 1 | 287 | 1 | 286 | 0.8296 |
0.8528 |
| AF-Q8YAF3-F1-model_v4 | 1 | 287 | 1 | 286 | 0.829 |
0.8517 |
| AF-P42394-F1-model_v4 | 1 | 287 | 5 | 292 | 0.824 |
0.8648 |
| AF-P29370-F1-model_v4 | 1 | 287 | 4 | 281 | 0.8231 |
0.8726 |
| AF-O30646-F1-model_v4 | 1 | 287 | 4 | 291 | 0.8185 |
0.8639 |
| AF-Q92F94-F1-model_v4 | 1 | 287 | 1 | 285 | 0.8182 |
0.8432 |
| AF-Q8YAF7-F1-model_v4 | 1 | 287 | 1 | 285 | 0.8178 |
0.843 |
| AF-P57368-F1-model_v4 | 1 | 287 | 5 | 292 | 0.8122 |
0.8614 |
| AF-Q81VJ7-F1-model_v4 | 1 | 287 | 1 | 283 | 0.8097 |
0.8378 |
| AF-Q81IX5-F1-model_v4 | 1 | 287 | 1 | 283 | 0.8085 |
0.8366 |