PROTEIN: HRGMv2_4062_6_3
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Protein File & Metadata
Source:
HRGMv2_4062_6_3.pdb
Genome ID:
Protein ID:
HRGMv2_4062_6_3
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Protein Sequence
MKKLTRLIAI VFAVTMCASL TACGPTGESN ATVVNIMNNG GGCGRIWLDN AIARFQEKIG 60 DKSYADGKQG VKFEIEHNIN TSTGTMGTSG YDIYFTTSDG YPRNLAQRGF LYDLTDFMNE 120 KFYDDGKTSV LDKIDPDYLD VLKGTDGKFY AIPHEEWFPG LTYDADLFKA NNLYIAAPEE 180 TNVRKYSCAY GSVNFVKDST AKKSLGNDGK PNTYDDGLPT TLVEFLVLCS KLKNDLSVTP 240 FTVSGLNAQY TNYLTEALWA SLAGYDGFRR AYTFDGEMEI VTGYTDEPLF KGINYKDDGD 300 KLKAIYKPAT EKITLTEETG YHATSDVNKY YASAFMQVIY DEGWYSQDSS NQSAHTAAQS 360 NFIFSGKNGK EKVAFMIEGD YWFNESVTVN NFRDYKTVYP NEPDRDLRWM PLPTSLDTPV 420 TTEEEGRPNV LLDTGASFTF VNKRTASKTD GCLEAVKDFL EFIYSDEEMS HFTECTGLGK 480 AAMNYRITEE DEAKMQEFKK SIWQLRKDNK VIYGSASNET FLSSPISFVP YQSSESNFYY 540 LINGKLYICD LYAHRAGYGA RNCFPYTQKT LEQWKSIYRG SKTL 584
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HZ48-F1-model_v4 | 28 | 578 | 21 | 420 | 0.6572 |
0.8104 |
| AF-A0A0H3GHK7-F1-model_v4 | 28 | 584 | 20 | 435 | 0.6446 |
0.7831 |
| AF-Q32AT3-F1-model_v4 | 27 | 580 | 20 | 434 | 0.6411 |
0.7824 |
| AF-A0A0H3H458-F1-model_v4 | 27 | 580 | 20 | 434 | 0.6394 |
0.7805 |
| AF-P0AG80-F1-model_v4 | 27 | 580 | 20 | 434 | 0.6392 |
0.7803 |
| AF-Q7CPK0-F1-model_v4 | 27 | 580 | 20 | 434 | 0.6392 |
0.7802 |
| AF-Q8DNU8-F1-model_v4 | 30 | 579 | 39 | 440 | 0.6259 |
0.7889 |
| AF-P59214-F1-model_v4 | 30 | 583 | 40 | 423 | 0.6157 |
0.7909 |
| AF-Q9HY16-F1-model_v4 | 27 | 555 | 17 | 354 | 0.5996 |
0.7884 |
| AF-Q9I0P5-F1-model_v4 | 27 | 556 | 23 | 367 | 0.5895 |
0.7756 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 28 | 584 | 27 | 745 | 0.5107 |
0.606 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7U1BNH7 | GH10 | 28 | 584 | 27 | 745 | 0.5107 |
0.606 |
| UJP10085.1 | GH154 | 23 | 557 | 681 | 1170 | 0.3693 |
0.614 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7eho-assembly2.cif.gz_B | 31 | 577 | 1 | 402 | 0.7099 |
0.8516 |
| 7x0k-assembly1.cif.gz_A | 31 | 578 | 1 | 406 | 0.6882 |
0.8233 |
| 3jzj-assembly1.cif.gz_A | 30 | 584 | 2 | 388 | 0.6879 |
0.8395 |
| 5dvf-assembly2.cif.gz_B | 30 | 577 | 1 | 389 | 0.6853 |
0.8332 |
| 5xpj-assembly2.cif.gz_B | 29 | 577 | 1 | 387 | 0.6847 |
0.8344 |
| 5xpj-assembly1.cif.gz_A | 30 | 577 | 1 | 389 | 0.6841 |
0.8322 |
| 4zs9-assembly1.cif.gz_A | 31 | 578 | 1 | 377 | 0.6811 |
0.8386 |
| 3oo6-assembly2.cif.gz_B | 31 | 578 | 2 | 390 | 0.6798 |
0.8283 |
| 4zs9-assembly2.cif.gz_B | 31 | 578 | 1 | 378 | 0.6788 |
0.8352 |
| 4zze-assembly1.cif.gz_A | 31 | 578 | 1 | 377 | 0.6786 |
0.8356 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92KZ7-F1-model_v4 | 28 | 577 | 20 | 414 | 0.6617 |
0.8187 |
| AF-Q9RUE8-F1-model_v4 | 28 | 579 | 19 | 420 | 0.6607 |
0.8113 |
| AF-Q8FVS7-F1-model_v4 | 28 | 579 | 22 | 411 | 0.6575 |
0.8212 |
| AF-Q578M8-F1-model_v4 | 28 | 579 | 22 | 411 | 0.6556 |
0.8188 |
| AF-Q2YKZ9-F1-model_v4 | 28 | 579 | 22 | 411 | 0.6547 |
0.8177 |
| AF-O58758-F1-model_v4 | 26 | 578 | 11 | 420 | 0.6494 |
0.7826 |
| AF-O50499-F1-model_v4 | 29 | 582 | 57 | 467 | 0.6461 |
0.8205 |
| AF-O32156-F1-model_v4 | 25 | 579 | 25 | 422 | 0.6449 |
0.8018 |
| AF-O34335-F1-model_v4 | 23 | 579 | 22 | 418 | 0.6436 |
0.8056 |
| AF-Q1CBH5-F1-model_v4 | 27 | 580 | 22 | 436 | 0.6421 |
0.7844 |