PROTEIN: HRGMv2_4061_2_14
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Protein File & Metadata
Source:
HRGMv2_4061_2_14.pdb
Genome ID:
Protein ID:
HRGMv2_4061_2_14
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Protein Sequence
MKTKKFLIAL VLAATFVAGI GCKEQPMKEY EKSMMTGNVG AHGHVQGIAT DGEYFYSSIT 60 SILVKQDASG KVVGSVTDFG DIDRCHLGDM TYNPDDGMLY ASLYVKLNGP MFPAEESAGD 120 AHDKNCYLVI VDPGAITGTE MRASDVCRVV DVTKPIAGYA EQNVGFDLRL GGKYAIKYGV 180 DSCTFGPKFG SKNKNGKKYL TMTCSTATYS VNIDGVSPYD REDADYFTIF QYDVTEWSKY 240 AKPFGEIANA TGPEKPDGTY FYYAGFHDYG VQNLCYDEYK NVYFVTTYYT DYHEPSRSKF 300 PNYTFFVIDP GYAKEQTLAG TGEKGLVLRS KYGKKHDSGV MGYELSASVG ILSLGDGRYY 360 VASVAKGGAA MTLYEWSKDT TECCINEVE 389
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EWG9-F1-model_v4 | 20 | 389 | 15 | 371 | 0.8103 |
0.8729 |
| AF-Q9I2Z7-F1-model_v4 | 24 | 389 | 27 | 332 | 0.5307 |
0.6327 |
| AF-A0A175VW60-F1-model_v4 | 25 | 389 | 27 | 346 | 0.4909 |
0.6591 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Q2CQH8-F1-model_v4 | CBM5 | 27 | 389 | 42 | 386 | 0.7121 |
0.8943 |
| AF-G8S3K4-F1-model_v4 | GH43_5 | 32 | 388 | 30 | 320 | 0.5821 |
0.7129 |
| AF-A0A2H1GSQ7-F1-model_v4 | GH43_5 | 31 | 387 | 29 | 319 | 0.5814 |
0.7112 |
| AF-A0A1H2DBM0-F1-model_v4 | GH43_5 | 32 | 388 | 31 | 321 | 0.5802 |
0.7115 |
| AF-A0A344LJV1-F1-model_v4 | GH43_5 | 32 | 388 | 33 | 321 | 0.5799 |
0.7158 |
| AF-A0A6V7BW93-F1-model_v4 | GH43_5 | 32 | 388 | 32 | 319 | 0.579 |
0.7145 |
| AF-A0A7G9KI50-F1-model_v4 | GH43_5 | 32 | 388 | 32 | 319 | 0.579 |
0.7144 |
| AF-A0A2U8E5V9-F1-model_v4 | GH43_33 | 8 | 389 | 8 | 366 | 0.5786 |
0.6319 |
| AF-A0A6V7B6Q8-F1-model_v4 | GH43_5 | 32 | 388 | 32 | 319 | 0.5783 |
0.7146 |
| AF-A0A0E3YQN8-F1-model_v4 | GH43_5 | 32 | 388 | 32 | 319 | 0.5778 |
0.7132 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Q2CQH8 | CBM5 | 27 | 389 | 42 | 386 | 0.7121 |
0.8943 |
| UNK80101.1 | GH43_26 | 7 | 389 | 21 | 349 | 0.5745 |
0.6685 |
| A0A7G5JTN0 | GH43_6 | 32 | 387 | 33 | 329 | 0.5701 |
0.6948 |
| A0A7H8XNH9 | GH43_30 | 32 | 389 | 34 | 341 | 0.5695 |
0.6837 |
| A0A5Q3QZS5 | GH43_5 | 32 | 388 | 46 | 336 | 0.5627 |
0.7047 |
| A0A2Z3GG31 | GH43_32 | 29 | 389 | 34 | 356 | 0.55 |
0.6495 |
| A0A9X1PLY6 | GH43_26 | 31 | 389 | 39 | 351 | 0.5481 |
0.6618 |
| A0A8H7Y9V7 | GH43_6 | 32 | 387 | 74 | 376 | 0.5455 |
0.6913 |
| E8QZQ9 | GH33 | 29 | 388 | 31 | 400 | 0.5161 |
0.5828 |
| A0A402CPG2 | CBM13 , GH43_26 | 4 | 389 | 4 | 311 | 0.5063 |
0.6936 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q01940-F1-model_v4 | 27 | 380 | 21 | 350 | 0.5362 |
0.6141 |