PROTEIN: HRGMv2_4060_8_4
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Protein File & Metadata
Source:
HRGMv2_4060_8_4.pdb
Genome ID:
Protein ID:
HRGMv2_4060_8_4
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Protein Sequence
MSQNKMPIVG FTAPPNGTLE IDHVKSYIGQ DFRTKERYAE YKECGFSQIL FSGEDKYLGE 60 PFETSDLKRM LDNAAACGLQ AIVFDERIMA LTVQGKNSVV EEMFGGSREK LFSFVKDCLS 120 VYRHHPAFYG ISVTDEPQVG KAQVLKEVID AVKNAAPDAF VHTCFLPCIQ DLGLVPGAFG 180 YGYDSVWKAY RNYIDKMAGT GIGYFGYDAY PFGMWDGENV VCAKFIRNMQ EVALGCRENG 240 VPFHMTIQSF SSGEFDEIRR VDESDLNWQA NLAMGFGCKK IYYFTYWRFT TRTGFHNTSA 300 IIDDDGTRTI YAEAQRNNAL IQRTFRHIAD LEYECSQLLP AEHDNPATQE MLSEDTGIVE 360 SFTADAPVLV TRLGGKNKKA FMFLNVRDPF EKYVNRFSVR LREKKEVYRA LIDGEELLLS 420 AENGSLCFDL KPGEAVWLLF E 441
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9VL27-F1-model_v4 | 1 | 441 | 21 | 408 | 0.6419 |
0.7225 |
| AF-Q8RX86-F1-model_v4 | 1 | 441 | 35 | 394 | 0.6244 |
0.7361 |
| AF-I1LBZ8-F1-model_v4 | 1 | 441 | 49 | 409 | 0.6142 |
0.7336 |
| AF-Q10427-F1-model_v4 | 1 | 440 | 15 | 477 | 0.6126 |
0.6593 |
| AF-A0A0R0FT50-F1-model_v4 | 1 | 441 | 62 | 421 | 0.6062 |
0.7346 |
| AF-I1L3R4-F1-model_v4 | 1 | 441 | 67 | 426 | 0.6039 |
0.7354 |
| AF-A0A0H3GTX2-F1-model_v4 | 1 | 441 | 4 | 540 | 0.5862 |
0.6614 |
| AF-Q0JG30-F1-model_v4 | 4 | 322 | 1 | 318 | 0.5717 |
0.6781 |
| AF-K0EX11-F1-model_v4 | 2 | 397 | 40 | 441 | 0.5699 |
0.6474 |
| AF-Q5JMU8-F1-model_v4 | 2 | 322 | 1 | 318 | 0.566 |
0.6727 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-C5C1Z0-F1-model_v4 | CBM66 | 1 | 441 | 48 | 624 | 0.6814 |
0.8057 |
| AF-A0A1G6TUH9-F1-model_v4 | CBM66 | 1 | 441 | 47 | 621 | 0.6813 |
0.8042 |
| AF-A0A1H1MJK6-F1-model_v4 | CBM66 | 1 | 441 | 69 | 657 | 0.6698 |
0.8094 |
| AF-A0A7G5LS84-F1-model_v4 | CBM66 | 1 | 441 | 71 | 642 | 0.6677 |
0.7975 |
| AF-A0A2K9P1H9-F1-model_v4 | GH140 | 1 | 440 | 13 | 433 | 0.6444 |
0.6897 |
| AF-A0A2Z2KRP7-F1-model_v4 | GH140 | 1 | 441 | 2 | 440 | 0.6423 |
0.6734 |
| AF-A0A518RKP9-F1-model_v4 | GH140 | 1 | 441 | 25 | 444 | 0.6422 |
0.6967 |
| AF-A0A7G9BSI0-F1-model_v4 | GH140 | 1 | 441 | 28 | 452 | 0.6414 |
0.6924 |
| AF-A0A1H1Y6P3-F1-model_v4 | GH140 | 1 | 441 | 40 | 456 | 0.6411 |
0.7068 |
| AF-A0A7L5E3V2-F1-model_v4 | GH140 | 1 | 441 | 38 | 461 | 0.6394 |
0.6973 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K6AWF3 | GH111 | 1 | 441 | 54 | 503 | 0.7036 |
0.7647 |
| B0C6E2 | GH111 | 1 | 441 | 36 | 493 | 0.6905 |
0.7577 |
| A0A1H1MJK6 | CBM66 | 1 | 441 | 69 | 657 | 0.6698 |
0.8094 |
| A0A7G5LS84 | CBM66 | 1 | 441 | 71 | 642 | 0.6677 |
0.7975 |
| A0A8J9RBH4 | GH27 | 7 | 441 | 1 | 382 | 0.6492 |
0.7237 |
| D3AI18 | GH140 | 1 | 441 | 14 | 450 | 0.6462 |
0.6776 |
| A0A2K9P1H9 | GH140 | 1 | 440 | 13 | 433 | 0.6444 |
0.6897 |
| A0A7G8UY61 | GH140 | 1 | 441 | 19 | 440 | 0.6439 |
0.6986 |
| A0A1H1ZR03 | GH27 | 1 | 440 | 31 | 404 | 0.6423 |
0.7388 |
| UTE73286.1 | GH140 | 1 | 441 | 24 | 443 | 0.639 |
0.6945 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3igu-assembly1.cif.gz_B | 1 | 441 | 4 | 386 | 0.6599 |
0.7288 |
| 1ktb-assembly1.cif.gz_A | 1 | 441 | 4 | 387 | 0.6557 |
0.7247 |
| 3lx9-assembly1.cif.gz_B | 1 | 441 | 4 | 390 | 0.6515 |
0.7162 |
| 1uas-assembly1.cif.gz_A | 1 | 441 | 4 | 362 | 0.6488 |
0.7362 |
| 4e2o-assembly1.cif.gz_A | 1 | 441 | 1 | 443 | 0.6485 |
0.6763 |
| 5a2c-assembly1.cif.gz_A | 1 | 441 | 1 | 448 | 0.6416 |
0.6725 |
| 5msy-assembly3.cif.gz_C | 1 | 441 | 5 | 442 | 0.6387 |
0.6724 |
| 3a5v-assembly1.cif.gz_A | 1 | 441 | 4 | 393 | 0.6349 |
0.6972 |
| 4qfu-assembly4.cif.gz_D | 1 | 441 | 6 | 439 | 0.6349 |
0.6776 |
| 4qfu-assembly8.cif.gz_H | 1 | 441 | 5 | 442 | 0.6345 |
0.6733 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q42656-F1-model_v4 | 1 | 441 | 19 | 378 | 0.6383 |
0.7367 |
| AF-Q8RX86-F1-model_v4 | 1 | 441 | 35 | 394 | 0.6244 |
0.7361 |
| AF-P14749-F1-model_v4 | 1 | 441 | 51 | 410 | 0.614 |
0.7359 |
| AF-Q10427-F1-model_v4 | 1 | 440 | 15 | 477 | 0.6126 |
0.6593 |
| AF-Q9Y865-F1-model_v4 | 1 | 441 | 22 | 441 | 0.6049 |
0.6541 |
| AF-D9SM34-F1-model_v4 | 6 | 441 | 1 | 659 | 0.5861 |
0.7173 |
| AF-P38940-F1-model_v4 | 1 | 441 | 129 | 587 | 0.579 |
0.674 |
| AF-Q65KX8-F1-model_v4 | 1 | 441 | 1 | 661 | 0.5788 |
0.7027 |
| AF-Q00012-F1-model_v4 | 1 | 327 | 41 | 377 | 0.5538 |
0.6926 |
| AF-Q8PE50-F1-model_v4 | 1 | 441 | 196 | 659 | 0.5508 |
0.6706 |