PROTEIN: HRGMv2_4055_2_28
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4055_2_28.pdb
Genome ID:
Protein ID:
HRGMv2_4055_2_28
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKIKRWMGFI MAMLFAMPFF GGCSDPVYED TRDDKYIVMV FTNTHYEEVP SYAAEMRVLL 60 GENDPNSDRM YAAGFIGPML LTQSIEQMQA EVNTAFDMAE RFNIPVYFQL DDVNNYTTLF 120 GGDAEVKYWE DPSMCEWIAF PEEGEEYGGQ NKYGELPRFW YNWGSWRVAK AVPNFASPKL 180 QELIVHNLKE GFLKPLTERY NKLKKENKAY LFAGCAVGWE THIPDYSSDN HLLNLSLDNL 240 PRDYATGVQM YEWEAAQYGY GALHALGYDQ AKLDAEAAEK GISSKQHMKN ILYQVIHDYS 300 ELLAKTVYET GVPRNKIFTH TVSASTTLDN DCTFYSPIWT AVNDYSTPGY TMSPVTCKYD 360 MTKMKQQLYA ADPNFNEFAC AEGYAAGLDT VEKCDAYFAE MFGNGARIVT AFGYPDVNVP 420 VFEFKRDPNF PYIISTNNWL RGDIKY 446
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GTD0-F1-model_v4 | 30 | 443 | 38 | 428 | 0.584 |
0.6664 |
| AF-U7PUC1-F1-model_v4 | 11 | 446 | 1 | 438 | 0.5544 |
0.7202 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UOA08279.1 | GH0 | 10 | 443 | 8 | 341 | 0.5923 |
0.7007 |
| AF-A0A387BPQ6-F1-model_v4 | GH35 | 27 | 446 | 1 | 430 | 0.5795 |
0.665 |
| AF-A0A7U4J896-F1-model_v4 | GH35 | 24 | 446 | 35 | 480 | 0.5731 |
0.6784 |
| WJG09535.1 | GH35 | 16 | 446 | 17 | 478 | 0.5708 |
0.6638 |
| AF-A0A2K9NL11-F1-model_v4 | GH35 | 25 | 446 | 22 | 469 | 0.5705 |
0.6724 |
| AF-A0A5B9E8K6-F1-model_v4 | GH35 | 22 | 446 | 15 | 458 | 0.5697 |
0.6642 |
| AF-A0A7U6B2K1-F1-model_v4 | GH35 | 24 | 446 | 17 | 468 | 0.5691 |
0.6683 |
| AF-A0A1L6QZP8-F1-model_v4 | GH35 | 25 | 446 | 20 | 466 | 0.5684 |
0.6686 |
| AF-A0A7H1MVA4-F1-model_v4 | GH35 | 21 | 446 | 11 | 441 | 0.5676 |
0.663 |
| AF-A0A3G6MM77-F1-model_v4 | GH35 | 24 | 446 | 17 | 462 | 0.5585 |
0.6667 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A402CTG9 | GH35 | 26 | 446 | 1 | 450 | 0.5814 |
0.6752 |
| A0A7U4J896 | GH35 | 24 | 446 | 35 | 480 | 0.5731 |
0.6784 |
| WJG09535.1 | GH35 | 16 | 446 | 17 | 478 | 0.5708 |
0.6638 |
| A0A9J7BMZ8 | GH35 | 25 | 446 | 15 | 456 | 0.5706 |
0.6622 |
| A0A5B9E8K6 | GH35 | 22 | 446 | 15 | 458 | 0.5697 |
0.6642 |
| A0A1G8APN1 | GH35 | 21 | 446 | 13 | 487 | 0.5666 |
0.6675 |
| BCM93509.1 | GH35 | 23 | 446 | 14 | 455 | 0.566 |
0.6608 |
| A0A402CNL7 | GH35 | 26 | 446 | 37 | 469 | 0.5648 |
0.667 |
| BCS85457.1 | GH35 | 34 | 446 | 1 | 393 | 0.5638 |
0.6839 |
| D6CYU7 | GH35 | 26 | 446 | 17 | 442 | 0.5606 |
0.6628 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1vep-assembly1.cif.gz_A | 33 | 446 | 9 | 446 | 0.5895 |
0.6911 |
| 1veo-assembly1.cif.gz_A | 33 | 446 | 9 | 446 | 0.5885 |
0.6901 |
| 6tbj-assembly8.cif.gz_H | 26 | 446 | 1 | 444 | 0.5852 |
0.6778 |
| 5jaw-assembly2.cif.gz_F | 26 | 446 | 1 | 446 | 0.585 |
0.6785 |
| 5jaw-assembly2.cif.gz_G-3 | 26 | 446 | 1 | 452 | 0.5829 |
0.6796 |
| 6tbj-assembly6.cif.gz_F | 26 | 446 | 1 | 452 | 0.5822 |
0.6786 |
| 5jaw-assembly1.cif.gz_E | 26 | 446 | 1 | 454 | 0.5821 |
0.6795 |
| 8pej-assembly1.cif.gz_C | 23 | 446 | 1 | 461 | 0.5821 |
0.6789 |
| 5jaw-assembly1.cif.gz_D-2 | 26 | 446 | 1 | 453 | 0.582 |
0.6788 |
| 6tbi-assembly2.cif.gz_B | 26 | 446 | 1 | 455 | 0.5815 |
0.6794 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.