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PROTEIN: HRGMv2_4055_27_4

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4055_27_4.pdb
Genome ID:
HRGMv2_4055
Protein ID:
HRGMv2_4055_27_4

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKVFKKMFSI   FLGAVLAAGT   LSAVSCAKEV   PYDPDNFISA   EEAQEMGEPY   KIVKEPITLK 60
VFVPISASNP   HYNEMASIQK   LSEITNIKFD   FIEASVSAYT   TLRTAAWQNK   NDLPDLFLFN 120
NPVSEQVTNY   RYGAMYAWND   DSLTVRGIQV   GSLIDNYMPN   YKALLENNFG   HEDEISAVSV 180
AMMDDGKMYS   LVCCNDIPRD   MTYKMYINQQ   WIDNLNEDYG   LGLPDACDIH   TLDDYVKVLR 240
AFKNYDANRN   DKANDEIPVT   AQSLYLLRNF   VLAAFGYVSN   GVEISADGKS   FVYVPATDEY 300
REYLRFMNGL   YEEKILDNST   FEKTTGSALA   GDGYQGKLGS   FPDAGAYLTV   GEELDEQYTS 360
FGPLRSEGYD   GELLQYGIKT   MFQATGAVIP   NGTPYVREIA   RLLDILYSDY   GVALMAQGVE 420
GVHWSWGDEE   KTSWTFHVPD   TWKDTSEQYR   ATISPSVGTG   CALYIPYEFD   KKQNDETLRR 480
INAEAEIYQD   YIKIPIPENI   RLDPDGYNRV   ALLTAALDAY   IKSTEANFIK   GVTDVDSDQA 540
WNSYLSDLKG   YNYEELVDIY   NEALK 565
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 28 565 25 498 0.7539 0.8565
AF-A0A133D019-F1-model_v4 30 565 34 481 0.6738 0.7947
AF-A0A133CDW9-F1-model_v4 28 562 35 444 0.6313 0.7736
AF-Q8DNU8-F1-model_v4 36 561 35 440 0.6272 0.7738
AF-K0F002-F1-model_v4 19 559 34 439 0.6266 0.7707
AF-A0A133CSA1-F1-model_v4 41 555 22 427 0.6263 0.7611
AF-A0A132ZDH4-F1-model_v4 53 553 27 427 0.6245 0.7667
AF-O53485-F1-model_v4 29 560 33 439 0.6232 0.7648
AF-A0A0H3GHK7-F1-model_v4 53 565 18 433 0.6209 0.7465
AF-A0A133CPC5-F1-model_v4 35 559 28 423 0.6168 0.763
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 29 565 35 502 0.7107 0.8225
AF-K8EJG7-F1-model_v4 CBM50 , CE4 30 563 29 417 0.6023 0.7513
A0A9Q8PNJ5 GH4 1 559 226 866 0.4847 0.5979
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 29 565 35 502 0.7107 0.8225
K8EJG7 CBM50 , CE4 30 563 29 417 0.6023 0.7513
A0A7U1BNH7 GH10 36 565 25 745 0.4855 0.593
A0A9Q8PNJ5 GH4 1 559 226 866 0.4847 0.5979
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3omb-assembly1.cif.gz_A 30 565 1 499 0.7993 0.864
6fth-assembly1.cif.gz_A 54 565 1 491 0.7984 0.8704
5g5y-assembly1.cif.gz_A 54 565 1 487 0.7642 0.8414
5xs8-assembly1.cif.gz_A 56 564 1 474 0.7604 0.8424
4tqu-assembly1.cif.gz_Q 47 565 1 484 0.7466 0.8268
6jhx-assembly2.cif.gz_B 47 565 1 479 0.7439 0.8244
5h6u-assembly1.cif.gz_A 50 565 1 481 0.7432 0.8238
5g62-assembly2.cif.gz_B 57 565 1 486 0.7413 0.817
3vlw-assembly2.cif.gz_B 48 565 1 483 0.7371 0.8161
5suo-assembly1.cif.gz_A 56 565 1 445 0.698 0.8002
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 27 565 28 531 0.7651 0.8491
AF-P37966-F1-model_v4 32 565 28 499 0.7458 0.8507
AF-Q795R2-F1-model_v4 32 565 30 495 0.741 0.8524
AF-Q8FVS7-F1-model_v4 36 559 20 411 0.654 0.8032
AF-Q578M8-F1-model_v4 36 559 20 411 0.6533 0.8024
AF-Q2YKZ9-F1-model_v4 35 559 20 411 0.653 0.8019
AF-O31518-F1-model_v4 41 559 25 427 0.6323 0.7732
AF-O32156-F1-model_v4 24 562 19 422 0.6237 0.7571
AF-Q7LYW7-F1-model_v4 42 562 35 450 0.6212 0.7573
AF-O50499-F1-model_v4 2 565 1 469 0.6207 0.6986
Download Full SwissProt Results