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PROTEIN: HRGMv2_4055_1_63

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4055_1_63.pdb
Genome ID:
HRGMv2_4055
Protein ID:
HRGMv2_4055_1_63

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRKTKKVFMS   VLLSAAMCLG   LCACGGEGGG   IVYPDFPLTE   NNGTPSWEQG   EKSDLEIDWY 60
VDDSTFSWAG   ASGSDVVDEI   YEKTGIKINF   QVPLNDDGTM   LNSILNSPDM   PDLISISCKN 120
TTRVQMQEEG   YVYPLDGLAE   RWAPTLFNNW   SPEINQLYAA   TDGQLYGVPC   LYYSMDDIEA 180
FDDQGSVLQA   NYAAIARKDY   LDAYVGYKKA   QDPNWSDKEA   TTPSGFIEMC   KWVKNTYNVD 240
HPILTDAFLT   TENNAGVYAL   AQFFSVPRES   EDGDLLYLEE   QEEFYKTLEF   LNTCYNEGLI 300
SDSNFSNTKQ   QQANIISAGG   CFIFIGPVQS   SLYGSATRNF   ALKYTEGLET   TNQYVGIVLT 360
DEEGNAPVMD   NLSGNGNMFT   MVTKDCDRPD   RVVKFIDYLT   SMEGQMLTYF   GVQGEHWNYE 420
IQPGETIVED   GITKTFKYGR   VQWTEEAFKL   ITSGQGSSVI   GALTFQLLRP   NKAIAKLATF 480
SGDEMYQFAT   YLTHNIKAVT   SEWAYTGKLL   NLDSVRDARG   GDNYLEVTTT   ATLCQQLWRE 540
RLAEIITASS   ADACREAYEA   TLTRVREYGI   EEVKEFDNAL   FHRLKEQFGM   EYVWAPLTDG 600
YDPAPVTSIY   GNTSYIVEIP   DFIERK 626
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 34 587 27 502 0.6623 0.7852
AF-K0EWS5-F1-model_v4 51 575 23 455 0.5913 0.7282
AF-K0F002-F1-model_v4 24 576 33 439 0.5889 0.7517
AF-Q8DNU2-F1-model_v4 28 577 22 445 0.5877 0.7294
AF-Q8DNH8-F1-model_v4 52 575 31 419 0.5857 0.76
AF-A0A0H3GHK7-F1-model_v4 51 579 18 432 0.5847 0.7312
AF-P71619-F1-model_v4 25 583 25 436 0.584 0.7351
AF-P76042-F1-model_v4 50 573 24 430 0.584 0.7381
AF-A0A133CPC5-F1-model_v4 50 573 30 423 0.5817 0.7501
AF-A0A133CDW9-F1-model_v4 52 579 42 444 0.5787 0.7486
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 32 587 34 506 0.6611 0.7908
A0A9Q8PNJ5 GH4 1 576 223 866 0.4508 0.5695
AF-A0A7U1BNH7-F1-model_v4 GH10 51 580 25 741 0.4501 0.5772
A0A242CSU4 CBM35 48 604 569 1003 0.387 0.6475
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 32 587 34 506 0.6611 0.7908
A0A9Q8PNJ5 GH4 1 576 223 866 0.4508 0.5695
A0A7U1BNH7 GH10 51 580 25 741 0.4501 0.5772
A0A242CSU4 CBM35 48 604 569 1003 0.387 0.6475
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fth-assembly1.cif.gz_A 51 587 1 496 0.7157 0.8106
5g62-assembly2.cif.gz_B 55 589 1 491 0.7114 0.8094
3omb-assembly1.cif.gz_A 34 586 1 503 0.7109 0.8004
5g5y-assembly1.cif.gz_A 51 589 1 494 0.7109 0.8074
5xs8-assembly1.cif.gz_A 54 581 1 474 0.7087 0.8188
4tqu-assembly1.cif.gz_Q 47 591 3 492 0.6951 0.7948
3vlw-assembly2.cif.gz_B 47 586 2 489 0.6945 0.7949
5h6u-assembly1.cif.gz_A 47 586 1 487 0.6933 0.7934
6jhx-assembly2.cif.gz_B 46 583 2 483 0.6928 0.7973
7eho-assembly2.cif.gz_B 55 573 1 402 0.6245 0.7713
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 33 589 32 538 0.7105 0.8206
AF-P37966-F1-model_v4 36 586 28 502 0.6755 0.8018
AF-Q795R2-F1-model_v4 35 586 30 498 0.6413 0.7684
AF-Q8FVS7-F1-model_v4 53 576 23 411 0.612 0.7863
AF-Q578M8-F1-model_v4 52 576 22 411 0.6111 0.7829
AF-Q2YKZ9-F1-model_v4 53 576 23 411 0.6096 0.7833
AF-O50499-F1-model_v4 3 582 1 469 0.6041 0.7044
AF-A0QXD9-F1-model_v4 17 576 38 477 0.5934 0.7371
AF-O07009-F1-model_v4 36 576 28 421 0.5843 0.7517
AF-P76042-F1-model_v4 50 573 24 430 0.584 0.7381
Download Full SwissProt Results