PROTEIN: HRGMv2_4055_11_22
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4055_11_22.pdb
Genome ID:
Protein ID:
HRGMv2_4055_11_22
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNALFKNAGY SLRLAAALIG TVVGAGFLSG TELVRFFPEA GYLPCVALSA LLFAGCFWLL 60 FLCGKKFGGY RGVLSALFAG TAPFFSAVML VSSFIMCAGM LAGLAATGSE GFSLPAVLLP 120 SAACVLLFFA GRGCKGLFTV NLLLVPFILA FIFSMAGEPW SAGGAEGTGA GRLLDVLAYV 180 CMNCFLAAPL ICDAGAEGKG GAGCAFAALI TGVCAAVLLA KISSDAAARE AQMPVLVLLS 240 GGVRVLFSLV CTAGILTTLF SSWYPLDARC AKGRRAALRR AALLAGAFLL SLMGLKHIVR 300 FVYPIVGGAG AIFLAVCAAR CGLLFDKPFF GKGDQRVHAC GKHAQDHRRR HHEV 354
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G0E6-F1-model_v4 | 1 | 332 | 1 | 354 | 0.8021 |
0.873 |
| AF-X8F5Q0-F1-model_v4 | 1 | 330 | 25 | 400 | 0.731 |
0.8719 |
| AF-Q2FXX3-F1-model_v4 | 1 | 330 | 13 | 379 | 0.7293 |
0.852 |
| AF-O05087-F1-model_v4 | 2 | 330 | 2 | 366 | 0.7292 |
0.8441 |
| AF-Q50103-F1-model_v4 | 1 | 330 | 22 | 396 | 0.7281 |
0.8645 |
| AF-Q0P803-F1-model_v4 | 1 | 329 | 2 | 392 | 0.7253 |
0.8553 |
| AF-P63340-F1-model_v4 | 1 | 329 | 1 | 388 | 0.7244 |
0.8488 |
| AF-P9WIZ5-F1-model_v4 | 1 | 330 | 24 | 398 | 0.7238 |
0.8612 |
| AF-Q8ZM95-F1-model_v4 | 1 | 329 | 1 | 388 | 0.7229 |
0.8471 |
| AF-Q58596-F1-model_v4 | 6 | 327 | 2 | 342 | 0.7168 |
0.8178 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6L9JN67 | GH13_3 | 9 | 333 | 23 | 408 | 0.6587 |
0.8253 |
| AF-A0A1Y6LTJ7-F1-model_v4 | GH43_21 | 6 | 354 | 63 | 611 | 0.5323 |
0.7794 |
| A0A8S2AWG3 | GT2 | 1 | 353 | 62 | 971 | 0.5033 |
0.7853 |
| QWU86486.1 | GT91 | 6 | 343 | 68 | 441 | 0.4872 |
0.8282 |
| A0A8F3AH03 | CBM48 | 6 | 328 | 2276 | 2680 | 0.4226 |
0.8243 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q9PBD6 | GH23 | 6 | 332 | 24 | 419 | 0.659 |
0.8266 |
| A0A6L9JN67 | GH13_3 | 9 | 333 | 23 | 408 | 0.6587 |
0.8253 |
| A0A4D6NR01 | GT1 | 3 | 331 | 15 | 405 | 0.5442 |
0.8255 |
| A0A1Y6LTJ7 | GH43_21 | 6 | 354 | 63 | 611 | 0.5323 |
0.7794 |
| A0A8S2AWG3 | GT2 | 1 | 353 | 62 | 971 | 0.5033 |
0.7853 |
| QWU86486.1 | GT91 | 6 | 343 | 68 | 441 | 0.4872 |
0.8282 |
| A0A6M7ZRF1 | GH35 | 9 | 353 | 46 | 1422 | 0.4655 |
0.7718 |
| A0A8F3AH03 | CBM48 | 6 | 328 | 2276 | 2680 | 0.4226 |
0.8243 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8e6n-assembly1.cif.gz_A | 6 | 331 | 1 | 369 | 0.7166 |
0.8372 |
| 6csf-assembly2.cif.gz_M | 2 | 332 | 34 | 422 | 0.7139 |
0.8498 |
| 6c3i-assembly1.cif.gz_A | 13 | 331 | 1 | 357 | 0.712 |
0.8366 |
| 6c3i-assembly2.cif.gz_B | 12 | 330 | 1 | 358 | 0.7119 |
0.8386 |
| 8e5v-assembly1.cif.gz_A | 13 | 331 | 1 | 363 | 0.7069 |
0.8362 |
| 8e6h-assembly1.cif.gz_A | 10 | 331 | 1 | 363 | 0.7026 |
0.8254 |
| 8e6i-assembly1.cif.gz_A | 11 | 331 | 1 | 363 | 0.701 |
0.825 |
| 7qia-assembly1.cif.gz_A | 8 | 330 | 5 | 370 | 0.6956 |
0.8229 |
| 8e6m-assembly1.cif.gz_A | 5 | 331 | 1 | 359 | 0.6941 |
0.8014 |
| 8e6l-assembly1.cif.gz_A | 5 | 331 | 1 | 356 | 0.6939 |
0.798 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O31674-F1-model_v4 | 6 | 338 | 4 | 347 | 0.8306 |
0.8887 |
| AF-P37520-F1-model_v4 | 4 | 327 | 1 | 338 | 0.8057 |
0.8773 |
| AF-O31809-F1-model_v4 | 7 | 336 | 7 | 363 | 0.7594 |
0.8411 |
| AF-Q9ZFB5-F1-model_v4 | 6 | 336 | 1 | 354 | 0.7587 |
0.8316 |
| AF-P49940-F1-model_v4 | 7 | 336 | 5 | 370 | 0.7567 |
0.8488 |
| AF-Q93N69-F1-model_v4 | 6 | 336 | 8 | 374 | 0.7504 |
0.8415 |
| AF-P39570-F1-model_v4 | 6 | 340 | 5 | 368 | 0.7482 |
0.8239 |
| AF-P44615-F1-model_v4 | 3 | 329 | 5 | 388 | 0.7373 |
0.8699 |
| AF-O34573-F1-model_v4 | 6 | 336 | 2 | 354 | 0.734 |
0.8081 |
| AF-P42964-F1-model_v4 | 1 | 330 | 8 | 372 | 0.7296 |
0.8475 |