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PROTEIN: HRGMv2_4054_7_29

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4054_7_29.pdb
Genome ID:
HRGMv2_4054
Protein ID:
HRGMv2_4054_7_29

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRICAMILS   VLLLFSAGAV   FSACDGNGAD   GDAVTLTVYR   ARANNHTVGD   DDDVVEAAIE 60
EAFYADTGIK   IDLVMRMYEN   DQLPDIVTTD   IVSSRADVDA   VMHTISADLS   GSAIMNYAMD 120
SYGTTIDVES   LLQQYGQNIL   AKIEEGDEDN   KGMRAAYLPI   ASGDSYEYQM   KIIPAVYQQD 180
DFAIMLRKDY   WEEAYSAGYT   QFNPEDYDIY   TNADGYKHLK   ISEFTQLMTE   INTWDNALNG 240
NAITYPVAGK   YWDIARVVGS   AFGADSFNNG   MYNGSVVPNY   FTDEWADFVG   LLYDWSSSGV 300
WERDSAQVND   DTRTNNFLAG   NHVAYMCYPT   SEQLINISRR   MSTADSSSSC   MIIAPLADED 360
GTVRGYYSQP   RSFEGIIIPA   KSTDAQVLVQ   FIDWMYSDVE   HYELAKYGIK   GTHWVEGEDV 420
TIGGETYKTW   EYPANKAAQY   NERPPYSGCW   EILINLNVSN   RIRGDWSPKE   QAWYVYITQQ 480
AETISNELEG   INMPEVPRAY   TASTTAMSNY   YTDNIIGNAI   AGRQSNGQDP   DDALREYRST 540
ALSSYADYFT   WLNARYDDAE   TFFASKFAE 569
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 25 561 29 502 0.732 0.8358
AF-A0A133D019-F1-model_v4 31 564 35 485 0.7006 0.823
AF-Q8DNU8-F1-model_v4 28 555 35 440 0.6448 0.7965
AF-Q7AQ51-F1-model_v4 32 555 33 445 0.6401 0.7821
AF-A0A133CPC5-F1-model_v4 26 552 28 423 0.6318 0.7829
AF-Q8DNN7-F1-model_v4 32 558 33 437 0.6284 0.7739
AF-K0F002-F1-model_v4 25 552 43 439 0.6262 0.7873
AF-P71619-F1-model_v4 27 562 34 436 0.6238 0.7708
AF-K0F2E6-F1-model_v4 27 558 40 442 0.6205 0.7713
AF-K0F7X1-F1-model_v4 33 552 28 409 0.6184 0.777
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 24 565 37 506 0.7356 0.8492
AF-A0A7U1BNH7-F1-model_v4 GH10 28 561 25 745 0.5005 0.6097
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 24 565 37 506 0.7356 0.8492
A0A7U1BNH7 GH10 28 561 25 745 0.5005 0.6097
A0A9Q8PNJ5 GH4 28 552 466 866 0.4825 0.8022
UJP10085.1 GH154 21 524 700 1168 0.3511 0.5919
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5suo-assembly1.cif.gz_A 33 564 1 451 0.7261 0.8239
6fth-assembly1.cif.gz_A 30 565 1 496 0.7144 0.7805
5xs8-assembly1.cif.gz_A 33 560 1 474 0.7133 0.7956
5h6u-assembly1.cif.gz_A 27 564 2 487 0.7115 0.7864
3vlw-assembly2.cif.gz_B 27 564 4 489 0.7104 0.7873
3omb-assembly1.cif.gz_A 26 564 1 503 0.7095 0.771
4tqu-assembly1.cif.gz_Q 27 568 5 492 0.7086 0.7848
6jhx-assembly2.cif.gz_B 27 564 5 483 0.7054 0.7867
5g5y-assembly1.cif.gz_A 29 568 1 494 0.6927 0.7609
5g62-assembly2.cif.gz_B 33 569 1 491 0.6771 0.7458
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 23 560 28 502 0.7569 0.8605
AF-Q795R2-F1-model_v4 22 561 30 498 0.7106 0.817
AF-A0A0H2URD6-F1-model_v4 21 569 36 538 0.6833 0.7666
AF-Q8FVS7-F1-model_v4 28 555 20 411 0.6611 0.8129
AF-Q578M8-F1-model_v4 28 555 20 411 0.6594 0.8111
AF-Q2YKZ9-F1-model_v4 28 555 20 411 0.6589 0.8108
AF-Q53684-F1-model_v4 24 555 21 426 0.6462 0.804
AF-Q7LYW7-F1-model_v4 1 554 1 450 0.6283 0.7174
AF-P94528-F1-model_v4 30 551 30 433 0.6269 0.7707
AF-Q9RUE8-F1-model_v4 28 555 16 420 0.6238 0.756
Download Full SwissProt Results