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PROTEIN: HRGMv2_4054_20_18

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4054_20_18.pdb
Genome ID:
HRGMv2_4054
Protein ID:
HRGMv2_4054_20_18

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKIVKFASL   FLAASLSLCL   CLAGCTDGKT   TSGGGSSLPD   YDAKKDELAV   TIAGWIAPDT 60
IGTEEQMQLV   KDVGIDTLFL   GAAGEGTYIP   NVSSPTEGDL   SVYALLEEYG   VRAYLNTGGN 120
IGGFAQIGQY   ADYSSVAGLS   FDEPNKGEIG   QIAAQVSAFN   QGGEGKNFYV   NLFPSFSTEV 180
QADFGVGNYR   EYLRYYCDNV   LEKLTVGEKW   LSADRYPLTF   DTNGEKALDV   GWLQDVEAVA 240
NVAREYEGVK   TNFFIQTMPY   GVKVPAGVQG   SHDRVPSYED   IRMQEYALLA   FGYSGISLFC 300
YMTPAVGVEF   TEEQFAMIDR   SGEPTQIYYD   AQKANREVLA   FDHVYLQFGW   QGVFTNDGGT 360
TTADGDRNKT   QNSSFSNLLG   RMDLAEVAFI   DSVTTSEDTL   FGYFMDGADN   EAVLAVNYNE 420
TSLGLQDTVT   LHFDPAYGYT   KAQCYVGGKE   VTYDLTENSL   TFTLGAGEGV   FVIPY 475
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9I1N2-F1-model_v4 41 474 39 442 0.5792 0.6699
AF-A0A0P0X580-F1-model_v4 19 475 36 410 0.5773 0.6949
AF-I1LBZ8-F1-model_v4 16 475 38 407 0.5745 0.6927
AF-K7MJ32-F1-model_v4 20 475 42 416 0.5725 0.6881
AF-K7N4X3-F1-model_v4 13 475 53 418 0.5705 0.7023
AF-A0A0R0FT50-F1-model_v4 20 475 16 421 0.5692 0.6403
AF-I1L3R4-F1-model_v4 15 475 61 425 0.5657 0.7016
AF-Q54EG4-F1-model_v4 16 475 45 426 0.5618 0.6975
AF-Q54X80-F1-model_v4 41 475 31 489 0.5476 0.642
AF-X8FHE1-F1-model_v4 17 408 19 360 0.5328 0.6479
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-B0C6E2-F1-model_v4 GH111 11 475 23 492 0.7004 0.7576
K6AWF3 GH111 13 475 46 503 0.6803 0.738
AF-A0A1H1YLE5-F1-model_v4 GH140 13 475 3 416 0.6599 0.7257
AF-A0A402CVS4-F1-model_v4 GH140 12 475 8 461 0.6328 0.6685
AF-C5C1Z0-F1-model_v4 CBM66 13 475 42 624 0.6287 0.738
AF-A0A5B8UST6-F1-model_v4 GH140 11 475 26 458 0.6284 0.701
AF-A0A1G6TUH9-F1-model_v4 CBM66 13 475 41 621 0.6265 0.7343
AF-A0A1H1MJK6-F1-model_v4 CBM66 13 475 60 657 0.6259 0.7515
AF-E6UHL9-F1-model_v4 GH27 10 475 1 382 0.625 0.7118
AF-A0A7U4KJ25-F1-model_v4 GH27 8 475 1 386 0.6213 0.7036
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
B0C6E2 GH111 11 475 23 492 0.7004 0.7576
K6AWF3 GH111 13 475 46 503 0.6803 0.738
A0A1H1YLE5 GH140 13 475 3 416 0.6599 0.7257
A0A6C0GX18 GH140 1 475 4 445 0.6398 0.6938
A0A1H1MJK6 CBM66 13 475 60 657 0.6259 0.7515
ULQ57839.1 GH140 13 475 30 459 0.6254 0.7047
A0A7G5LS84 CBM66 13 475 59 642 0.6193 0.7344
A0A919ZM04 GH27 8 475 11 403 0.6145 0.6989
A0A9J7BLP5 GH140 1 475 19 480 0.6128 0.6585
WFB35353.1 GH39 44 475 4 472 0.6088 0.687
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6f4c-assembly1.cif.gz_B 13 475 2 362 0.6154 0.7166
4e2o-assembly1.cif.gz_A 44 475 1 443 0.6012 0.6565
5a2c-assembly1.cif.gz_A 44 475 1 448 0.5961 0.6537
4zn2-assembly3.cif.gz_C 42 474 11 413 0.5957 0.6714
3a5v-assembly1.cif.gz_A 13 475 2 392 0.5894 0.6668
4nzf-assembly1.cif.gz_A 13 475 1 429 0.5755 0.624
4nx0-assembly1.cif.gz_D 12 475 1 429 0.575 0.6252
7pr9-assembly2.cif.gz_B 47 475 19 437 0.5743 0.6432
6t75-assembly2.cif.gz_DDD 4 475 1 652 0.5726 0.6764
7omi-assembly2.cif.gz_BBB 2 475 1 658 0.5718 0.6754
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q42656-F1-model_v4 15 475 8 377 0.6075 0.7057
AF-Q9Y865-F1-model_v4 20 475 13 441 0.571 0.6265
AF-A2QEJ9-F1-model_v4 20 475 13 441 0.5709 0.6263
AF-Q65KX8-F1-model_v4 46 475 1 660 0.5587 0.7209
AF-O31529-F1-model_v4 47 475 1 660 0.5554 0.7181
AF-C7ASJ5-F1-model_v4 13 474 30 694 0.5523 0.679
AF-G4MLU0-F1-model_v4 11 347 14 364 0.4865 0.6327
Download Full SwissProt Results