PROTEIN: HRGMv2_4054_20_17
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Protein File & Metadata
Source:
HRGMv2_4054_20_17.pdb
Genome ID:
Protein ID:
HRGMv2_4054_20_17
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Protein Sequence
MATFRISGWY VPPADENIFR LIKEAGLNHI FIDGDEIGNG CKDISLAERY LCLCDTVGLE 60 AYVQKGNDVS VQELVEKADV LRRHKSFCGV LVFDEPAADM FGELGEERSR FFQEGALGDF 120 FVNLYPSYAR SECIIYSYSA YVRSFAETLV RSGGTKDWLS FDHYPLMYEQ DHTFGLSDHW 180 LSDTQTVAET GKAFGLRTNA FVQTMPFSAN GDAFGSRDRI PSPADLRLQV YTYLAFGFAG 240 ITYFCVGTPI PNFEFLERHY AMFDRSGRPT PLYDAVKGLN GEINCFAHEY AAMKREGTYL 300 IRKEESAPTR CFADQKPFSS TERIRSVSAD GNVLFGHFSE KGCEALVPVN FGETTRERIK 360 LCSVRFNGRR PYTLWQHGIC TRGQEEELTI RLEPGEGVFI RIG 403
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175VZB8-F1-model_v4 | 1 | 403 | 205 | 562 | 0.5968 |
0.7859 |
| AF-U7Q0B0-F1-model_v4 | 1 | 403 | 247 | 645 | 0.5739 |
0.7202 |
| AF-A0A175W6H1-F1-model_v4 | 1 | 403 | 26 | 401 | 0.5695 |
0.6296 |
| AF-A0A0N4U8S0-F1-model_v4 | 1 | 380 | 39 | 399 | 0.5413 |
0.6107 |
| AF-Q5QLK3-F1-model_v4 | 1 | 403 | 39 | 649 | 0.5344 |
0.6677 |
| AF-O13716-F1-model_v4 | 1 | 395 | 18 | 377 | 0.5329 |
0.6201 |
| AF-A0A5K4F102-F1-model_v4 | 3 | 397 | 50 | 442 | 0.5202 |
0.5685 |
| AF-A0A2K6VPZ7-F1-model_v4 | 1 | 378 | 75 | 450 | 0.5095 |
0.5884 |
| AF-Q9SCV8-F1-model_v4 | 1 | 403 | 41 | 408 | 0.4984 |
0.7012 |
| AF-Q54MV6-F1-model_v4 | 1 | 402 | 52 | 421 | 0.4983 |
0.7097 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B0C6E2-F1-model_v4 | GH111 | 1 | 403 | 38 | 492 | 0.7299 |
0.8318 |
| K6AWF3 | GH111 | 1 | 403 | 56 | 503 | 0.7165 |
0.8085 |
| AF-C5C1Z0-F1-model_v4 | CBM66 | 1 | 403 | 52 | 624 | 0.6853 |
0.8392 |
| AF-A0A1G6TUH9-F1-model_v4 | CBM66 | 1 | 403 | 50 | 621 | 0.6837 |
0.8359 |
| AF-A0A1H1MJK6-F1-model_v4 | CBM66 | 1 | 403 | 73 | 657 | 0.6801 |
0.8499 |
| AF-A0A7G5LS84-F1-model_v4 | CBM66 | 1 | 403 | 75 | 642 | 0.6787 |
0.8391 |
| AF-A0A3G3EC91-F1-model_v4 | GH140 | 1 | 403 | 17 | 424 | 0.6647 |
0.7007 |
| AF-A0A3T1D741-F1-model_v4 | CBM22 | 1 | 403 | 35 | 421 | 0.6425 |
0.8839 |
| AF-A0A3G9IUN1-F1-model_v4 | CBM22 | 1 | 403 | 35 | 421 | 0.6424 |
0.8838 |
| AF-W0IZN8-F1-model_v4 | GH39 | 2 | 403 | 31 | 494 | 0.6359 |
0.7207 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B0C6E2 | GH111 | 1 | 403 | 38 | 492 | 0.7299 |
0.8318 |
| K6AWF3 | GH111 | 1 | 403 | 56 | 503 | 0.7165 |
0.8085 |
| A0A1H1YLE5 | GH140 | 1 | 403 | 16 | 416 | 0.6862 |
0.7217 |
| A0A1H1MJK6 | CBM66 | 1 | 403 | 73 | 657 | 0.6801 |
0.8499 |
| A0A7G5LS84 | CBM66 | 1 | 403 | 75 | 642 | 0.6787 |
0.8391 |
| A0A3G3EC91 | GH140 | 1 | 403 | 17 | 424 | 0.6647 |
0.7007 |
| WFB35353.1 | GH39 | 1 | 403 | 4 | 472 | 0.6485 |
0.7225 |
| K6ARA4 | GH140 | 1 | 403 | 36 | 468 | 0.6483 |
0.7136 |
| A0A2R3Z2X6 | GH140 | 1 | 403 | 57 | 460 | 0.6465 |
0.7063 |
| USD18578.1 | GH39 | 1 | 402 | 41 | 427 | 0.6441 |
0.7092 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4zn2-assembly3.cif.gz_C | 1 | 402 | 12 | 413 | 0.6357 |
0.6707 |
| 3dc0-assembly1.cif.gz_A | 1 | 403 | 1 | 422 | 0.6216 |
0.6582 |
| 6t75-assembly2.cif.gz_EEE | 1 | 403 | 7 | 642 | 0.621 |
0.7717 |
| 6t7g-assembly2.cif.gz_EEE | 1 | 403 | 7 | 648 | 0.6197 |
0.7726 |
| 7oms-assembly2.cif.gz_DDD | 1 | 403 | 9 | 650 | 0.619 |
0.7726 |
| 6t6g-assembly2.cif.gz_EEE | 1 | 403 | 7 | 650 | 0.6189 |
0.7724 |
| 7omi-assembly2.cif.gz_FFF | 1 | 403 | 7 | 650 | 0.6186 |
0.772 |
| 6t75-assembly2.cif.gz_DDD | 1 | 403 | 13 | 652 | 0.6178 |
0.7719 |
| 6t6g-assembly2.cif.gz_DDD | 1 | 403 | 13 | 655 | 0.6178 |
0.7731 |
| 6t75-assembly1.cif.gz_BBB | 1 | 403 | 7 | 648 | 0.6177 |
0.7702 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O31529-F1-model_v4 | 1 | 403 | 1 | 660 | 0.6069 |
0.7616 |
| AF-Q65KX8-F1-model_v4 | 1 | 403 | 2 | 660 | 0.6053 |
0.7596 |
| AF-Q59219-F1-model_v4 | 1 | 403 | 36 | 514 | 0.5945 |
0.6834 |
| AF-Q8PE50-F1-model_v4 | 1 | 403 | 35 | 659 | 0.5468 |
0.688 |
| AF-Q3J3M8-F1-model_v4 | 1 | 403 | 47 | 663 | 0.5414 |
0.6831 |
| AF-O13716-F1-model_v4 | 1 | 395 | 18 | 377 | 0.5329 |
0.6201 |
| AF-Q54MV6-F1-model_v4 | 1 | 402 | 52 | 421 | 0.4983 |
0.7097 |
| AF-Q10NX8-F1-model_v4 | 1 | 403 | 45 | 415 | 0.4783 |
0.7065 |