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PROTEIN: HRGMv2_4054_20_12

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4054_20_12.pdb
Genome ID:
HRGMv2_4054
Protein ID:
HRGMv2_4054_20_12

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKLVSLLLG   FALAAGTLGL   FAGCSTEEPY   DPDNFLPNGT   AENPWQIVAE   PVTIDIFVPT 60
SSVNPPYSDM   KMFKVISEMT   NLQFNFTEAN   VSAYENLRNM   AWGDERSRPD   LFLFNNNVSE 120
QIVYSQLGVL   TPFNSDSFVT   ATGVEAGNLI   DNYMPNYKAL   LEDNFGEHDA   GEDGYVEQAS 180
DVVTLDDGYM   YATLTVNNVP   RDLTYKMFIN   KQWIDNYNTY   YAQQGEELPQ   PEDIRTWEQL 240
VEVLRAFRDY   DVNRNGNAND   EIPVSSAALN   FLRNYCLQSC   GYVTPNYEIT   TTNTLAPESE 300
IVYVPKTDAY   REYLRKMKAL   YDEGLLDNCF   SATDDTLVVK   GHNHRLGMFQ   AAAAYLVVSE 360
EYEDEYVTIA   PVTSEYYQGD   PIQLGFPEFA   ASGAVIPASS   PYVREVARLL   DLMYSEIGCQ 420
LIAYGLEGED   WEWDLREDGT   RGDGSLDTDT   WTFHVPDGWY   ESGKTQEDYR   ATITPNVGTA 480
NALYWNYDFV   GKMNDPTITA   LNRMSEIYMD   YLKVPIPSAI   KMTEEEYNMR   AVYESTLQNY 540
VETAERSFIV   GDSGYDVESD   TDWNAYVQRL   VGYRCDDLLK   CYNDALARYK   QSKS 594
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 17 592 17 502 0.7544 0.8556
AF-A0A133D019-F1-model_v4 15 592 18 485 0.6559 0.7613
AF-A0A133CSA1-F1-model_v4 39 577 22 427 0.6276 0.7764
AF-A0A133CDW9-F1-model_v4 18 584 29 444 0.604 0.7464
AF-Q8DNU8-F1-model_v4 48 583 36 440 0.6039 0.7614
AF-Q2G1E9-F1-model_v4 4 584 16 417 0.6008 0.7464
AF-Q7AQ51-F1-model_v4 23 582 31 445 0.5969 0.7397
AF-K0F8J3-F1-model_v4 18 582 20 435 0.5925 0.7263
AF-O53485-F1-model_v4 19 582 30 439 0.5919 0.7364
AF-K0F002-F1-model_v4 3 581 33 439 0.5894 0.7374
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 29 594 36 506 0.6781 0.7977
AF-A0A1Q2TKJ3-F1-model_v4 GH49 4 582 272 797 0.4731 0.6115
A0A9Q8PNJ5 GH4 13 581 281 866 0.4643 0.5784
AF-A0A7U1BNH7-F1-model_v4 GH10 34 591 25 745 0.4606 0.5505
UJP10085.1 GH154 1 553 210 1168 0.3335 0.4998
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 29 594 36 506 0.6781 0.7977
A0A1Q2TKJ3 GH49 4 582 272 797 0.4731 0.6115
A0A9Q8PNJ5 GH4 13 581 281 866 0.4643 0.5784
A0A7U1BNH7 GH10 34 591 25 745 0.4606 0.5505
UJP10085.1 GH154 1 553 210 1168 0.3335 0.4998
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3omb-assembly1.cif.gz_A 27 593 1 503 0.7754 0.8508
6fth-assembly1.cif.gz_A 49 594 1 496 0.7745 0.8554
5g5y-assembly1.cif.gz_A 49 594 1 494 0.7579 0.841
5xs8-assembly1.cif.gz_A 52 586 1 474 0.7094 0.804
4tqu-assembly1.cif.gz_Q 42 594 1 491 0.7037 0.7878
5h6u-assembly1.cif.gz_A 45 594 1 487 0.6983 0.7839
6jhx-assembly2.cif.gz_B 42 592 1 483 0.6969 0.7851
5g62-assembly2.cif.gz_B 52 594 1 491 0.6952 0.7781
3vlw-assembly2.cif.gz_B 42 594 1 489 0.6947 0.7788
5suo-assembly1.cif.gz_A 51 594 1 451 0.679 0.786
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 20 594 22 538 0.7561 0.8385
AF-Q795R2-F1-model_v4 29 591 30 498 0.7441 0.8682
AF-P37966-F1-model_v4 30 590 28 502 0.722 0.8373
AF-O31518-F1-model_v4 39 581 25 427 0.6274 0.7812
AF-Q578M8-F1-model_v4 26 581 19 411 0.617 0.7715
AF-O06989-F1-model_v4 17 584 20 416 0.593 0.741
AF-Q9K491-F1-model_v4 32 581 27 424 0.5905 0.7423
AF-P29822-F1-model_v4 49 581 24 422 0.5857 0.7329
AF-Q7LYW7-F1-model_v4 40 584 36 450 0.5838 0.7267
AF-O32156-F1-model_v4 26 584 21 422 0.5832 0.7248
Download Full SwissProt Results