dbCAN Logo

PROTEIN: HRGMv2_4053_55_5

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4053_55_5.pdb
Genome ID:
HRGMv2_4053
Protein ID:
HRGMv2_4053_55_5

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKRIFKTAAA   GAAALALCFS   CAACTDSSQV   KKGIPDYSAY   EDQLSVEFGA   WISPPPAGTY 60
IDPDGPNGKN   ESYITVERYQ   EAKAAGLDFV   IGLYEQGASS   ADVLTALDCA   AEAGMEYLVR 120
SDLMLYANST   PERLERAIEP   VINHEACKGI   FVVDEPGADR   FHALGAVNRL   YKQITDKYFY 180
LNLFPSYARA   EQYLDDSYRS   YLENYCKIVD   NSMISVDYYP   FGDDGARYSV   SEGLLASLEL 240
VQTLSDKYDM   EHWEFLQGMK   ADASSKTPDY   YDIRMQIYTS   MCFGVQVMQY   FCYFTPAGYS 300
QGDVSLAAFI   DEQGNQTPIY   AAAQKINAEI   HAFDHVYLSY   DWQGTMTVVG   SENEKGKNTA 360
FNLMESPLTS   HPRIESVTAT   QDTVIGTYQD   KDGYDGFMVT   NYTIPGNRIE   DDVAITFKDA 420
DAVICYREGK   PSQIDLEDGV   LNLHLGAGEG   VFLIPVKL 458
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0R0FT50-F1-model_v4 4 458 40 421 0.5954 0.6964
AF-G4VLE1-F1-model_v4 89 458 1 336 0.5909 0.7024
AF-K7N4X3-F1-model_v4 1 458 6 420 0.5904 0.641
AF-Q7Y223-F1-model_v4 40 430 52 430 0.5213 0.6188
AF-Q8ZLG5-F1-model_v4 40 458 235 728 0.51 0.6838
AF-I1LNG1-F1-model_v4 43 458 36 641 0.5018 0.6521
AF-I1K4F3-F1-model_v4 43 457 37 640 0.4988 0.6436
AF-I6YB54-F1-model_v4 42 429 43 377 0.4961 0.6194
AF-Q6P1J0-F1-model_v4 42 391 94 452 0.4911 0.6372
AF-F1M1G2-F1-model_v4 42 391 95 452 0.4907 0.6367
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K6AWF3 GH111 40 456 54 503 0.7079 0.8222
AF-B0C6E2-F1-model_v4 GH111 35 458 17 494 0.7002 0.8103
AF-A0A1G6TUH9-F1-model_v4 CBM66 42 458 50 623 0.6571 0.8346
AF-C5C1Z0-F1-model_v4 CBM66 42 458 51 626 0.6566 0.8357
AF-A0A1H1MJK6-F1-model_v4 CBM66 42 458 72 660 0.6489 0.8443
AF-A0A7G5LS84-F1-model_v4 CBM66 13 456 49 642 0.6478 0.7843
AF-A0A3T1D741-F1-model_v4 CBM22 9 458 9 575 0.6227 0.8008
AF-A0A3G9IUN1-F1-model_v4 CBM22 16 458 19 575 0.6193 0.8083
UKS27947.1 CBM32 1 458 4 597 0.611 0.8133
AF-A0A7G8UNM4-F1-model_v4 CBM32 2 458 14 858 0.5997 0.7869
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K6AWF3 GH111 40 456 54 503 0.7079 0.8222
B0C6E2 GH111 35 458 17 494 0.7002 0.8103
A0A1H1MJK6 CBM66 42 458 72 660 0.6489 0.8443
A0A7G5LS84 CBM66 13 456 49 642 0.6478 0.7843
UOE51041.1 GH140 40 458 32 432 0.6379 0.7238
A0A3T1D741 CBM22 9 458 9 575 0.6227 0.8008
A0A6M6JEN0 GH140 40 458 42 383 0.6216 0.775
UKS27947.1 CBM32 1 458 4 597 0.611 0.8133
A0A7G8UNM4 CBM32 2 458 14 858 0.5997 0.7869
WJH32652.1 CBM22 14 458 21 691 0.599 0.802
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3lx9-assembly1.cif.gz_B 43 458 7 390 0.6208 0.6994
5a2c-assembly1.cif.gz_A 40 458 1 450 0.6171 0.6846
8i0a-assembly1.cif.gz_A 29 458 7 524 0.5806 0.6722
6d25-assembly1.cif.gz_B 30 456 8 493 0.5698 0.6485
5xb7-assembly1.cif.gz_D 45 458 1 685 0.5695 0.7558
5xb7-assembly2.cif.gz_B 45 455 1 685 0.5674 0.7581
5xb7-assembly2.cif.gz_F 45 458 1 691 0.5665 0.7573
6zdk-assembly1.cif.gz_AAA 42 395 1 362 0.5504 0.6406
6tvk-assembly1.cif.gz_AAA 44 458 1 659 0.545 0.7114
7x87-assembly1.cif.gz_B 22 458 1 705 0.5368 0.686
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q42656-F1-model_v4 15 457 6 378 0.6195 0.7041
AF-P22795-F1-model_v4 43 458 1 592 0.5364 0.671
AF-A1D8Y6-F1-model_v4 40 430 36 373 0.5302 0.6514
AF-Q7Y223-F1-model_v4 40 430 52 430 0.5213 0.6188
AF-P16216-F1-model_v4 41 339 71 406 0.5165 0.7353
Download Full SwissProt Results