PROTEIN: HRGMv2_4050_3_20
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Protein File & Metadata
Source:
HRGMv2_4050_3_20.pdb
Genome ID:
Protein ID:
HRGMv2_4050_3_20
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Protein Sequence
MREKNAGKYI AAAVIMAVNP FCTACGSDKP VLPTYSEQSL MISGNWLPDE MNVAQLELYK 60 AAGLNTVWFG NHSGQWRSDE QYYLGSELTE RVLGYCREAG LKAVLQYGDW IAVACDPDYR 120 TQKPFSAYDV YDDYKDIIVG VSIVDEPQKH HMEQYGNDLL TEDYKSVYSV PYMCNLFPTY 180 QPMNAIGYSS YDEYLRDYAE KIMSDFEENR FISVDYYPFG KTNERYSEWL RCYEKVAVVA 240 KEYDAKMYCY IQTAEGAEFQ KSLREEDIRL QINTALCFGV SGYSYYCYAV PKTGGEYLYD 300 KCLLNQDGSP SELYEYAQKI NGEVGSMSSA FLAYRWDRTE GFTDYSDGNG CTAIGLLAGT 360 GGFGDRKYVS AVESGGDLLV GCFSDEDGGE GYMLVNFSLQ EKKRVEAVVS LKNASYIAVY 420 GGISKENGAL VKCKEGQCTV ALEPGEGKFI VPLV 454
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9QWR8-F1-model_v4 | 1 | 454 | 11 | 404 | 0.6145 |
0.693 |
| AF-G4VLE1-F1-model_v4 | 67 | 454 | 1 | 335 | 0.5929 |
0.7056 |
| AF-Q54TS5-F1-model_v4 | 9 | 453 | 22 | 470 | 0.587 |
0.6287 |
| AF-A0A0H3GP41-F1-model_v4 | 8 | 454 | 3 | 685 | 0.5796 |
0.714 |
| AF-A0A175VZB8-F1-model_v4 | 1 | 454 | 115 | 563 | 0.5701 |
0.648 |
| AF-X8FHE1-F1-model_v4 | 1 | 387 | 20 | 360 | 0.5422 |
0.6508 |
| AF-I1MQP2-F1-model_v4 | 7 | 443 | 99 | 496 | 0.5142 |
0.619 |
| AF-I1MM62-F1-model_v4 | 7 | 453 | 28 | 410 | 0.4527 |
0.684 |
| AF-Q9SCV4-F1-model_v4 | 7 | 442 | 33 | 770 | 0.4473 |
0.608 |
| AF-Q10NX8-F1-model_v4 | 7 | 448 | 34 | 758 | 0.444 |
0.5983 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B0C6E2-F1-model_v4 | GH111 | 6 | 454 | 24 | 493 | 0.7144 |
0.7798 |
| K6AWF3 | GH111 | 5 | 453 | 46 | 503 | 0.7134 |
0.7702 |
| AF-C5C1Z0-F1-model_v4 | CBM66 | 5 | 454 | 42 | 625 | 0.6509 |
0.7672 |
| AF-A0A1G6TUH9-F1-model_v4 | CBM66 | 6 | 454 | 41 | 622 | 0.6504 |
0.7669 |
| AF-A0A1H1MJK6-F1-model_v4 | CBM66 | 5 | 454 | 60 | 658 | 0.6494 |
0.7816 |
| AF-A0A7G5LS84-F1-model_v4 | CBM66 | 1 | 453 | 53 | 642 | 0.6484 |
0.7667 |
| AF-A0A3T1D741-F1-model_v4 | CBM22 | 1 | 454 | 18 | 423 | 0.6214 |
0.8763 |
| AF-L0GP78-F1-model_v4 | GH39 | 6 | 453 | 23 | 432 | 0.6198 |
0.6907 |
| AF-A0A448QED6-F1-model_v4 | GH39 | 4 | 453 | 20 | 431 | 0.619 |
0.6881 |
| AF-A0A023WU97-F1-model_v4 | GH39 | 10 | 453 | 24 | 431 | 0.6187 |
0.6915 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B0C6E2 | GH111 | 6 | 454 | 24 | 493 | 0.7144 |
0.7798 |
| K6AWF3 | GH111 | 5 | 453 | 46 | 503 | 0.7134 |
0.7702 |
| UOE51041.1 | GH140 | 7 | 454 | 22 | 431 | 0.6506 |
0.7228 |
| A0A1H1MJK6 | CBM66 | 5 | 454 | 60 | 658 | 0.6494 |
0.7816 |
| A0A7G5LS84 | CBM66 | 1 | 453 | 53 | 642 | 0.6484 |
0.7667 |
| A0A3T1D741 | CBM22 | 1 | 454 | 18 | 423 | 0.6214 |
0.8763 |
| A0A2W1WK30 | GH39 | 36 | 453 | 12 | 395 | 0.6213 |
0.7035 |
| A0A6M8MTN3 | GH39 | 6 | 454 | 19 | 426 | 0.6173 |
0.686 |
| A0A8J9RBH4 | GH27 | 41 | 454 | 1 | 383 | 0.6172 |
0.6952 |
| WJH32652.1 | CBM22 | 1 | 454 | 21 | 438 | 0.615 |
0.8689 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6f4c-assembly1.cif.gz_B | 7 | 454 | 2 | 363 | 0.6331 |
0.7232 |
| 1ktb-assembly1.cif.gz_A | 7 | 454 | 2 | 388 | 0.63 |
0.701 |
| 3igu-assembly1.cif.gz_B | 6 | 454 | 2 | 387 | 0.6298 |
0.7006 |
| 3tv8-assembly1.cif.gz_A | 6 | 454 | 2 | 390 | 0.6221 |
0.6909 |
| 3a5v-assembly1.cif.gz_A | 6 | 454 | 2 | 393 | 0.6081 |
0.6757 |
| 3lrm-assembly1.cif.gz_C | 5 | 454 | 2 | 452 | 0.5986 |
0.6244 |
| 3lrk-assembly1.cif.gz_A | 5 | 454 | 2 | 452 | 0.597 |
0.6226 |
| 1t0o-assembly1.cif.gz_A | 5 | 454 | 2 | 413 | 0.5964 |
0.6487 |
| 5cxp-assembly1.cif.gz_A-2 | 38 | 453 | 15 | 387 | 0.5937 |
0.6832 |
| 3dc0-assembly1.cif.gz_A | 10 | 453 | 1 | 422 | 0.5923 |
0.6354 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9QWR8-F1-model_v4 | 1 | 454 | 11 | 404 | 0.6145 |
0.693 |
| AF-P19668-F1-model_v4 | 9 | 454 | 1 | 667 | 0.5859 |
0.7172 |
| AF-C9S0R2-F1-model_v4 | 9 | 454 | 1 | 667 | 0.5857 |
0.717 |
| AF-Q0TUR6-F1-model_v4 | 7 | 453 | 2 | 689 | 0.5849 |
0.7223 |
| AF-Q09HN2-F1-model_v4 | 9 | 453 | 1 | 676 | 0.5813 |
0.7153 |
| AF-C8WV58-F1-model_v4 | 8 | 454 | 3 | 685 | 0.5796 |
0.7152 |
| AF-O31529-F1-model_v4 | 9 | 454 | 1 | 661 | 0.5759 |
0.7016 |
| AF-Q65KX8-F1-model_v4 | 9 | 454 | 1 | 661 | 0.5746 |
0.7001 |
| AF-Q5FJ41-F1-model_v4 | 7 | 452 | 1 | 667 | 0.5728 |
0.6995 |
| AF-C6H178-F1-model_v4 | 7 | 452 | 1 | 667 | 0.5726 |
0.6997 |