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PROTEIN: HRGMv2_4050_3_17

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4050_3_17.pdb
Genome ID:
HRGMv2_4050
Protein ID:
HRGMv2_4050_3_17

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRYKKAIGS   ALAAFLAVSG   GLCGCDGTPQ   AEAPDYSASD   KQFSFYAYAP   PGDGIYTVDG 60
VSYDGAHDEN   GNRISFQTVE   KYREYAECGF   DTIMFQADDP   YTGTETWEES   HLKSIMDKAN 120
EVGLRAIMFD   SRLHDLSAST   EPIVGAGCRF   STQEELEEYV   ASCMRDYTGH   PAFYGLLIRD 180
EPTYEMFPAI   GALYRAIKKN   YPDCFIQCNL   FPLDPSNAAA   YAEGGTVSTA   NASYRAYLEE 240
FIDRTGADYV   MFDSYPMMKD   TKGGNIIKEA   HLKGLEIATD   VARSKNVALY   AVAQSCSWKK 300
NGIQRARACT   EADMYWQTNL   YMGMGVKQIS   YFTYQRKRTN   STSGEYFDDG   TSFIRSNGEK 360
TELYDWMQKI   HGEMQKLASV   ILNFDYVGLR   SYVGGTAPCP   IGFLAGVQDC   EFTMIDDAQT 420
SDSSVMLITE   LYDDEKNQYM   YMIQNIADPS   VVAEPLTASV   TFSDTQALAV   YDKGERTLSE 480
YDGEYTVELA   PGEAVFVLPY 500
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9URZ0-F1-model_v4 40 500 31 420 0.5746 0.6938
AF-Q9FXT4-F1-model_v4 40 500 62 416 0.574 0.7381
AF-Q94CR1-F1-model_v4 23 368 10 334 0.5508 0.6888
AF-A0A132ZDY8-F1-model_v4 39 500 42 561 0.5473 0.6361
AF-Q8S9Q6-F1-model_v4 21 371 8 334 0.5411 0.6732
AF-K7M508-F1-model_v4 1 500 16 587 0.5295 0.5853
AF-Q5SRI9-F1-model_v4 41 435 99 459 0.4907 0.6497
AF-Q5VSG8-F1-model_v4 40 436 101 457 0.4817 0.6422
AF-Q9FH80-F1-model_v4 9 488 200 689 0.4262 0.5194
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
UTE73286.1 GH140 38 500 25 442 0.6129 0.705
AF-D4LCA1-F1-model_v4 GH27 40 500 4 419 0.6087 0.6819
AF-A0A0A7CP29-F1-model_v4 GH27 40 500 17 392 0.6075 0.7302
AF-A0A7L5A3E9-F1-model_v4 GH140 38 500 54 476 0.601 0.7032
AF-A0A250KHH4-F1-model_v4 GH27 40 500 35 408 0.5999 0.7307
AF-A0A0K1NKG4-F1-model_v4 GH27 40 500 35 408 0.5995 0.7302
AF-A0A1B1I6E0-F1-model_v4 GH27 40 500 35 408 0.5987 0.7293
F0HA27 GH27 40 500 35 408 0.5984 0.7289
AF-A0A7D4FZW7-F1-model_v4 GH27 40 500 35 408 0.5981 0.7285
AF-A0A1H0CU39-F1-model_v4 GH27 40 500 31 388 0.5929 0.7331
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K6AWF3 GH111 39 500 56 503 0.6763 0.7667
A0A1H1MJK6 CBM66 39 500 72 657 0.641 0.7932
A0A2K9P1H9 GH140 38 499 19 433 0.6144 0.7022
UTE73286.1 GH140 38 500 25 442 0.6129 0.705
A0A2N5NNP4 GH140 38 500 16 426 0.6112 0.7044
A0A0A7CP29 GH27 40 500 17 392 0.6075 0.7302
F0HA27 GH27 40 500 35 408 0.5984 0.7289
A0A3G3GM71 GH140 38 500 59 453 0.593 0.7226
A0A0P0YRM2 GH39 3 493 12 407 0.5925 0.6887
A0A223E5I9 GH13 7 500 6 440 0.5884 0.6727
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
1uas-assembly1.cif.gz_A 40 500 7 361 0.6131 0.7378
5msy-assembly3.cif.gz_C 38 500 24 440 0.6128 0.7106
4qfu-assembly3.cif.gz_C 38 500 24 439 0.6102 0.7133
4qfu-assembly8.cif.gz_H 38 500 24 440 0.6091 0.7119
4qfu-assembly12.cif.gz_L 38 500 24 443 0.6081 0.7077
4qfu-assembly6.cif.gz_F 38 500 29 445 0.6059 0.7114
7df1-assembly2.cif.gz_B-2 40 500 4 400 0.591 0.6783
6t75-assembly2.cif.gz_EEE 39 500 6 642 0.5679 0.6953
6t7g-assembly2.cif.gz_EEE 39 500 6 648 0.5661 0.6955
7omi-assembly2.cif.gz_FFF 39 500 6 650 0.5654 0.6955
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9URZ0-F1-model_v4 40 500 31 420 0.5746 0.6938
AF-Q9FXT4-F1-model_v4 40 500 62 416 0.574 0.7381
AF-A1CBW8-F1-model_v4 40 500 26 401 0.5372 0.7259
AF-Q0CPK2-F1-model_v4 40 500 28 404 0.5356 0.7243
AF-P28351-F1-model_v4 40 500 39 422 0.5261 0.7076
AF-Q2UT06-F1-model_v4 40 500 32 414 0.5257 0.7034
AF-B8MWJ5-F1-model_v4 40 500 32 411 0.5236 0.7052
AF-Q5SRI9-F1-model_v4 41 435 99 459 0.4907 0.6497
AF-Q9FH80-F1-model_v4 9 488 200 689 0.4262 0.5194
Download Full SwissProt Results