PROTEIN: HRGMv2_4046_26_17
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Protein File & Metadata
Source:
HRGMv2_4046_26_17.pdb
Genome ID:
Protein ID:
HRGMv2_4046_26_17
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Protein Sequence
MEKSKKIKWI VLIAALIGIL IASSVTAGVL IAKNRSVKTV YNSAQNGIRA YETLEIGVEL 60 PKNYLNPYDS SKVEVDAIIQ NGDIKQTVPM FWYEDYERSL FGDVEKLTYT GRSFWMLRYV 120 PKTAGEYKIT VSVKENGKKK YSDKATTVQV FEGNADGYLR VSSDNTHLEF ENGRAFNGIG 180 HNLCGWEYAG GDNMAGTYDY DRWLNELAAN GANMVQFDLC EGDNLEWTKK DGELPYSDGY 240 NGLRWFNPQT AWKTDYKVKI CESSGIYFRF SLYHWEDFDN EGDNNFPDWG WNRNPYNSAN 300 GGTAENVTEF FKGEESRVAT KNYIRYCVAR WGYSENLLMW ELWNETDAPE VVWAEGDSYY 360 NQKPLVADWH EEMGEYIKSI DVNRHLVTTS FANASNGDEV WGLDCIDVTT FHRYTMYNDG 420 TEGLYNSVKA LYLIVNSRLK TYDKPVIAGE FALSPAGDVQ RENDREGIGF HNQIWASVFS 480 GSFGTAMHWN WDSYLDRYDL YYHYAPLSEF LRYEDLRGAR RSDNVMEEGE TLFMTMAKSD 540 RAFVWIRDRE YDYNQVMNGY QPKTISGAKV SLDLPDGEYV VTFFDTYTGK NLSTENMTAQ 600 GGKLDVAVKD FQKDIAIKIV SVSQIYTSAV LAEGGACDET KVSGDRIVLN GTGADIGGMS 660 DAGYYAYLTV TGDFDYIVRV DKVSYTGEFS KAGIMMRVNT APSGKMAFIG MNGTGDVSFI 720 TRKAMLAEHG EWVDSFVGSY LKMERRGDTI RAYISADGKN YKMIGETEFV NLKDELLIGV 780 AVSSKNTLGY NESIFNCVSL MQK 803
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UWX64108.1 | GH5 | 31 | 644 | 22 | 595 | 0.7617 |
0.9107 |
| AF-A9AYF5-F1-model_v4 | GH5 | 21 | 622 | 22 | 591 | 0.7606 |
0.9122 |
| AF-A4XMG8-F1-model_v4 | GH5 | 28 | 623 | 26 | 611 | 0.7564 |
0.899 |
| AF-A0A5B8V202-F1-model_v4 | GH5 | 9 | 622 | 9 | 560 | 0.7471 |
0.898 |
| AF-A0A1Y0FZV3-F1-model_v4 | GH5 | 28 | 621 | 16 | 565 | 0.7346 |
0.8901 |
| AF-A0A6B9YWN8-F1-model_v4 | GH5 | 31 | 622 | 24 | 563 | 0.7341 |
0.9036 |
| AF-A0A291QV99-F1-model_v4 | GH5 | 28 | 625 | 20 | 559 | 0.7331 |
0.8987 |
| AF-A0A4P6YGA8-F1-model_v4 | GH5 | 13 | 620 | 8 | 569 | 0.7293 |
0.8695 |
| AF-D5BJU6-F1-model_v4 | GH5 | 37 | 622 | 1 | 531 | 0.7286 |
0.8823 |
| AF-A0A4Y1WLN3-F1-model_v4 | GH5 | 3 | 669 | 1 | 554 | 0.7275 |
0.8668 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UWX64108.1 | GH5 | 31 | 644 | 22 | 595 | 0.7617 |
0.9107 |
| A9AYF5 | GH5 | 21 | 622 | 22 | 591 | 0.7606 |
0.9122 |
| A4XMG8 | GH5 | 28 | 623 | 26 | 611 | 0.7564 |
0.899 |
| A0A6B9YWN8 | GH5 | 31 | 622 | 24 | 563 | 0.7341 |
0.9036 |
| A0A4P6YGA8 | GH5 | 13 | 620 | 8 | 569 | 0.7293 |
0.8695 |
| A0A4Y1WLN3 | GH5 | 3 | 669 | 1 | 554 | 0.7275 |
0.8668 |
| UZJ44704.1 | GH5 | 25 | 622 | 18 | 574 | 0.7246 |
0.8755 |
| A0A2X2LES3 | GH5 | 25 | 620 | 13 | 556 | 0.7218 |
0.876 |
| A0A6I4I0C1 | GH5 | 28 | 621 | 18 | 559 | 0.7215 |
0.8817 |
| A0A4U1HIN1 | GH5 | 49 | 624 | 16 | 515 | 0.7209 |
0.9086 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4n0r-assembly1.cif.gz_B | 43 | 622 | 1 | 511 | 0.658 |
0.8099 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q59979-F1-model_v4 | 153 | 762 | 38 | 822 | 0.4477 |
0.589 |