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PROTEIN: HRGMv2_4041_4_25

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4041_4_25.pdb
Genome ID:
HRGMv2_4041
Protein ID:
HRGMv2_4041_4_25

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKDYRTIAAS   DLGKGSRIGL   ELCETEVDLY   WKMAMEVAEL   IESNNQRGEP   TVMIVPYGPL 60
GPYARLLYLV   NKRRISLKNC   WFINMDEYLD   QHQAYLPKDD   PLSFRGGMDR   IFYGLVDEEL 120
NVPEQQRIFP   EPGNEQYIWE   LIQRFGKLDM   CWGGVGITGH   IAFNEPPESG   ESCTDEEFLE 180
RPTRILRIAR   ETKTINAYMN   AGADLDAIPD   YCITVGMKEI   NFARKIRMLM   PRDWNAAILR 240
KALHGPITCH   VPVSLFQNHP   DAKIYALALA   ATTPVVPEIR   VYNK 284
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q04802-F1-model_v4 18 274 1 245 0.8223 0.902
AF-Q2G0K8-F1-model_v4 18 273 1 241 0.8167 0.9164
AF-Q9XVJ2-F1-model_v4 18 275 1 247 0.8157 0.9193
AF-A0A132YZ81-F1-model_v4 18 275 1 233 0.8116 0.9052
AF-Q8ZQX7-F1-model_v4 18 275 1 248 0.811 0.9094
AF-Q32IQ2-F1-model_v4 18 275 1 248 0.8109 0.9093
AF-A0A0H3GK04-F1-model_v4 18 275 1 248 0.8107 0.909
AF-A0A3Q0KJ37-F1-model_v4 18 275 1 248 0.8094 0.8911
AF-A0A077ZK28-F1-model_v4 18 275 1 248 0.8091 0.9075
AF-P0A759-F1-model_v4 18 275 1 248 0.8086 0.907
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H4PAS9-F1-model_v4 CE9 18 276 1 246 0.5602 0.8902
AF-G0IWQ0-F1-model_v4 CE9 18 276 1 246 0.5595 0.8879
AF-A0A1W2H3T6-F1-model_v4 CE9 18 274 1 243 0.5568 0.8938
AF-J9UUU6-F1-model_v4 CE9 18 275 1 240 0.5437 0.8964
AF-G0ELA3-F1-model_v4 CE9 18 275 1 240 0.5404 0.8906
AF-D8I9Y7-F1-model_v4 CE9 18 275 1 240 0.5403 0.8905
AF-K0JLB5-F1-model_v4 CE9 18 275 1 240 0.5402 0.8902
AF-D5U6N5-F1-model_v4 CE9 18 275 1 240 0.5401 0.8901
AF-A0A3B6VCF9-F1-model_v4 CE9 18 275 1 240 0.5399 0.8898
AF-A0A3B6VIU1-F1-model_v4 CE9 18 275 1 240 0.5395 0.8891
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0H4PAS9 CE9 18 276 1 246 0.5602 0.8902
A0A3B6VIU1 CE9 18 275 1 240 0.5395 0.8891
U5ECU6 CE9 16 274 390 631 0.5318 0.8662
A0A871RFD9 GH3 1 274 971 1250 0.4961 0.8424
A0A875S4F4 GH3 1 275 734 1287 0.4895 0.8339
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2bkv-assembly1.cif.gz_A 18 275 1 241 0.8308 0.9123
5hj5-assembly2.cif.gz_B 18 275 1 248 0.8079 0.9078
7lqn-assembly2.cif.gz_I 17 274 1 248 0.8012 0.8926
7lqm-assembly2.cif.gz_D 18 275 1 248 0.8011 0.901
1cd5-assembly1.cif.gz_A 18 275 1 248 0.7951 0.8927
7lqm-assembly1.cif.gz_A 18 274 1 243 0.7948 0.8968
7lqm-assembly1.cif.gz_B 18 275 1 246 0.7931 0.8954
1ne7-assembly1.cif.gz_E 18 275 1 248 0.7928 0.9028
3hn6-assembly1.cif.gz_D 17 275 3 251 0.7865 0.887
7lqm-assembly2.cif.gz_C 18 275 1 238 0.7861 0.9022
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q97MK9-F1-model_v4 18 274 1 241 0.8406 0.9214
AF-Q4L9T8-F1-model_v4 18 274 1 242 0.8396 0.919
AF-Q8CTR3-F1-model_v4 18 274 1 242 0.8372 0.9182
AF-A0PYW1-F1-model_v4 18 275 1 241 0.8342 0.9153
AF-Q890L6-F1-model_v4 18 274 1 241 0.8341 0.9154
AF-C3L2N7-F1-model_v4 18 274 1 241 0.8335 0.9197
AF-C1FV12-F1-model_v4 18 274 1 241 0.8333 0.9195
AF-B1IKY4-F1-model_v4 18 274 1 241 0.8333 0.9195
AF-A7FX73-F1-model_v4 18 274 1 241 0.8329 0.919
AF-Q49VB6-F1-model_v4 18 274 1 242 0.8328 0.9124
Download Full SwissProt Results