PROTEIN: HRGMv2_4031_98_4
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Protein File & Metadata
Source:
HRGMv2_4031_98_4.pdb
Genome ID:
Protein ID:
HRGMv2_4031_98_4
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Protein Sequence
MAYQNLRARQ LPLSLLLCLA PAAAFAADAP ETAEAPSATE TAAEATWVDE QHSSVRRGIK 60 GLAHQLDDWF GEPDPDDPAS ANLRIILDTN WNKYDDVSFK PRIRGRLRLP VLEERLSVVF 120 GDDSLDNELQ DEAHLGADGR LHDSSDKRFD RRQSRDENSS LALRWSDITR RTGLDTDVDL 180 GVRSGNDIYV RFKASKNWQL DNDYNTRLEQ IYRYGIDSKH YVRTNFEVKR APAGEPFVAN 240 HLHVQYTHDN DEEWEWGNSL YRQHDFAPGK WLNYGVYAGG FIENKKADIN GYGPFVGYRQ 300 PFWRDWLFAQ TELNYYNDRR ENRSHHVGVL LRLEALF 337
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1D6LMU3-F1-model_v4 | 9 | 337 | 1 | 382 | 0.5219 |
0.5878 |
| AF-Q9I2D1-F1-model_v4 | 55 | 337 | 30 | 399 | 0.509 |
0.659 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5oyk-assembly1.cif.gz_A | 31 | 337 | 3 | 319 | 0.5588 |
0.6188 |
| 5mdo-assembly1.cif.gz_A | 30 | 337 | 1 | 341 | 0.5566 |
0.6336 |
| 4aui-assembly1.cif.gz_C | 33 | 337 | 1 | 308 | 0.5529 |
0.6076 |
| 3nsg-assembly1.cif.gz_C | 33 | 337 | 3 | 341 | 0.5525 |
0.6312 |
| 7fdy-assembly1.cif.gz_B | 30 | 337 | 4 | 339 | 0.5478 |
0.6198 |
| 6ehc-assembly1.cif.gz_A | 28 | 336 | 4 | 307 | 0.5478 |
0.6032 |
| 3wi5-assembly1.cif.gz_A | 33 | 337 | 1 | 312 | 0.5475 |
0.6034 |
| 6ehb-assembly1.cif.gz_B | 31 | 336 | 15 | 317 | 0.5394 |
0.6034 |
| 6eus-assembly2.cif.gz_E | 29 | 337 | 6 | 346 | 0.5322 |
0.6059 |
| 2o4v-assembly1.cif.gz_B | 31 | 337 | 6 | 411 | 0.524 |
0.6427 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67297-F1-model_v4 | 39 | 335 | 17 | 309 | 0.5646 |
0.637 |
| AF-Q9KK91-F1-model_v4 | 27 | 337 | 26 | 366 | 0.5525 |
0.6403 |
| AF-Q9Z6M6-F1-model_v4 | 7 | 337 | 2 | 438 | 0.5505 |
0.6485 |
| AF-Q822F4-F1-model_v4 | 3 | 336 | 6 | 451 | 0.539 |
0.6378 |
| AF-P46027-F1-model_v4 | 30 | 337 | 23 | 371 | 0.5373 |
0.6297 |
| AF-P20148-F1-model_v4 | 31 | 337 | 17 | 348 | 0.5372 |
0.6173 |
| AF-Q5L5E8-F1-model_v4 | 3 | 337 | 10 | 448 | 0.5317 |
0.6254 |
| AF-B0BC06-F1-model_v4 | 30 | 335 | 67 | 461 | 0.5293 |
0.6777 |
| AF-P0C6Q6-F1-model_v4 | 33 | 336 | 5 | 341 | 0.5286 |
0.6073 |
| AF-A5F934-F1-model_v4 | 30 | 336 | 36 | 341 | 0.5248 |
0.5987 |