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PROTEIN: HRGMv2_4007_20_24

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4007_20_24.pdb
Genome ID:
HRGMv2_4007
Protein ID:
HRGMv2_4007_20_24

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRILLIALM   MLAGVSATYS   QTTQNLPKEI   YVEGGKHHVQ   GIAYDKAAGL   MYYSFTTSFV 60
KTNLEGKVVG   SIDRIQGHLG   AMTFNPADRK   VYASLECKDD   VIGAGLSTFA   KGRSMFYIAI 120
IDVDKVTEVG   MDSENNDAFR   IVCVKEATKD   FHLTGFADKN   YEHFYGCSGI   DGVTIAPKLG 180
SKGGKAYLYV   AYGIYGDIGR   NDNNHQVLLR   YDIKKLNEYA   GVVKFGDFYS   EGPAKPSDKY 240
FAYTGNTNWG   VQNLAYDKES   GRMLMAVYKG   KKGIFPNYDM   FVFDVASKPA   KAKLAGVLYD 300
RTKHKVIGSV   ESPVSGFYFK   YGSTGLCPVG   DGLFYFAEPG   KNKETGNQFA   RTRLYRWTGD 360
PEKPFERL 368
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0EWG9-F1-model_v4 19 368 18 370 0.8549 0.9114
AF-G4LWB6-F1-model_v4 9 368 55 437 0.4176 0.5372
AF-Q3TWF6-F1-model_v4 4 368 151 472 0.3773 0.544
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1Q2CQH8-F1-model_v4 CBM5 23 368 42 385 0.7493 0.9153
UQN08350.1 GH43_5 13 368 17 336 0.5902 0.6724
AF-A0A3G8QZU6-F1-model_v4 GH43_5 23 366 34 324 0.5787 0.6968
AF-A0A0E3YQN8-F1-model_v4 GH43_5 28 367 33 319 0.5775 0.7003
AF-A0A223QA86-F1-model_v4 GH43_5 27 367 46 334 0.5768 0.7073
AF-V5LER1-F1-model_v4 GH43_5 27 366 38 324 0.5764 0.7033
AF-E3ED00-F1-model_v4 GH43_5 27 366 38 324 0.5763 0.7032
AF-A0A0F7W073-F1-model_v4 GH43_5 27 367 39 331 0.5763 0.6957
AF-D7B0M6-F1-model_v4 GH43_5 27 367 46 334 0.576 0.7065
AF-A0A1C3CPN9-F1-model_v4 GH43_5 27 366 38 324 0.5753 0.702
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1Q2CQH8 CBM5 23 368 42 385 0.7493 0.9153
UQN08350.1 GH43_5 13 368 17 336 0.5902 0.6724
A0A7G5JTN0 GH43_6 27 366 33 329 0.5774 0.6874
A0A518K7V6 GH43_5 27 368 28 322 0.5718 0.6924
BCM93508.1 GH43_5 27 368 29 335 0.5699 0.6677
A0A7H8PZ90 GH43 20 368 27 323 0.5683 0.6761
A0A6V7C5X1 GH43_5 27 367 47 334 0.5671 0.6988
A0A7D6XNF3 GH43_3 24 368 35 328 0.5645 0.6836
A0A229TV44 GH43_30 28 367 52 334 0.5561 0.6962
A0A7C8KV70 GH43_6 27 368 48 366 0.551 0.6686
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8XB94-F1-model_v4 27 359 41 278 0.5684 0.7634
AF-Q8FA95-F1-model_v4 27 359 47 284 0.5626 0.7627
AF-A1AJL2-F1-model_v4 27 359 47 284 0.5618 0.7615
AF-Q01940-F1-model_v4 23 364 21 350 0.5479 0.6136
AF-Q3TWF6-F1-model_v4 4 368 151 472 0.3773 0.544
Download Full SwissProt Results