dbCAN Logo

PROTEIN: HRGMv2_4005_1_19

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4005_1_19.pdb
Genome ID:
HRGMv2_4005
Protein ID:
HRGMv2_4005_1_19

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKKKYLLMTA   LALTCGSAMA   QENKGEVVSL   LPDGVTLVVG   TERKMDKQKN   VVVVGTPKKG 60
YKAFFAAKTA   DNGEELWVTD   GTKEGTHMVK   DINPGAGSSS   PAHIARFNDK   VVFSAVNDEN 120
DREPWISDGT   EEGTFQLADC   YATGDGDPMF   FMQVNENKVV   FAAVDDESAE   YDPDKGAQHW 180
VWVTDGTTDG   TKRISDKIQF   DINPKEQTQQ   DYKYARVGRK   VFFRGDNPDG   QYGTELCVSD 240
GTEEGTFMVA   DINYEVNQDA   LNSGYEGYTR   DSAIDNMTNF   DNKYCFFKAW   DPAHGNEFRV 300
SDGTEEGTYV   IWDQKPNVIN   GIGESGDTYG   PSREMAFGRI   WSRVATTHIG   DELAGWTSVK 360
DDKPVIYDVN   NIEPTATHNA   FVDPGCVFQG   NYFFCAAHGF   IEDACDESQK   WGGELWIYDG 420
KNAPRVQMDF   CPGVQCDWVK   ELTVAGGSLY   WYNEANNNPT   VYGSGLYRLD   ESTESPIVCP 480
QITDKGDFVH   TLRNLGGQIL   YCSATTNGLY   LFKYHKTGWD   GKSDMGILEP   IYDGTTDQTN 540
PDYVDPYWAQ   VETGVEGVKA   ETANTANVYT   VDGVQVRTNV   AADKATEGLQ   KGIYVVNGKK 600
VVVR 604
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q54GL5-F1-model_v4 9 550 4 582 0.515 0.6449
AF-A5PMG8-F1-model_v4 18 549 77 650 0.4929 0.6439
AF-Q6PHU5-F1-model_v4 18 549 87 656 0.492 0.6421
AF-A0A175W328-F1-model_v4 24 520 187 586 0.4668 0.6756
AF-B0R1C4-F1-model_v4 40 504 52 545 0.4557 0.6448
AF-Q18253-F1-model_v4 33 487 3 563 0.4347 0.6514
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A7M2WYV3 CBM96 27 604 78 1028 0.4764 0.6317
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A7M2WYV3 CBM96 27 604 78 1028 0.4764 0.6317
UOQ69144.1 CBM57 1 604 26 585 0.4588 0.5548
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5nmt-assembly1.cif.gz_A 18 549 9 568 0.5408 0.6441
5mrh-assembly1.cif.gz_A 18 549 3 554 0.5353 0.631
5mri-assembly1.cif.gz_A 18 550 4 573 0.5343 0.6394
5nnj-assembly2.cif.gz_C 18 548 6 556 0.5341 0.6321
6eho-assembly1.cif.gz_A 18 548 10 565 0.5326 0.63
5nmt-assembly1.cif.gz_B 19 549 7 567 0.5237 0.6281
4n7e-assembly1.cif.gz_A 17 550 4 563 0.5204 0.6186
2ecf-assembly1.cif.gz_A-2 36 505 16 497 0.4634 0.6335
3g0b-assembly1.cif.gz_B 40 505 23 528 0.463 0.6485
5yp1-assembly1.cif.gz_A 36 505 17 491 0.458 0.6239
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q6PHU5-F1-model_v4 18 549 87 656 0.492 0.6421
AF-Q18253-F1-model_v4 33 487 3 563 0.4347 0.6514
AF-C4JI06-F1-model_v4 7 550 2 587 0.408 0.633
AF-Q7SH60-F1-model_v4 13 544 15 1528 0.4033 0.6438
AF-C4Y3C1-F1-model_v4 8 548 187 1463 0.3953 0.6207
Download Full SwissProt Results