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PROTEIN: HRGMv2_4001_67_6

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4001_67_6.pdb
Genome ID:
HRGMv2_4001
Protein ID:
HRGMv2_4001_67_6

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Detailed structural information will appear here after analysis...

Protein Sequence 
MAQTKIAAVM   RAGVYSPNHI   GNDATIMNTV   AEQLRKRGCE   VRIYTEEQFA   AGNATEDVVI 60
NMCRERRSTE   LLQQMEDSGC   LVINSGYGIE   NCIRERQARI   LLGSGIPYPQ   SIIVDTDEAV 120
ARRLEKMDMR   QCWIKRGDFH   AQHAEDVCYV   RTPAEAQDVL   QEYFLRGFRR   AVISRHLPGR 180
LVKFYGVAGT   NFFHWFRPFE   EEPRGLKSVL   AAVSDADTRQ   AEKAVDANLR   TLCSRAAKEL 240
NLVVYGGECI   EASDGTLTII   DFNDWPSFSA   CRQDAATNIA   KAVIAAARQK   R 291
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P45241-F1-model_v4 4 291 1 301 0.7648 0.8043
AF-Q58407-F1-model_v4 3 289 1 288 0.7571 0.7846
AF-Q58037-F1-model_v4 4 289 1 291 0.7565 0.788
AF-P0A2U2-F1-model_v4 4 291 1 294 0.7424 0.7808
AF-A0A0H3GM45-F1-model_v4 4 291 1 294 0.7421 0.7806
AF-Q5F6M0-F1-model_v4 1 290 2 303 0.742 0.7863
AF-P0C0U4-F1-model_v4 4 291 1 294 0.7399 0.7786
AF-Q32ID0-F1-model_v4 4 291 1 294 0.7391 0.7778
AF-P07862-F1-model_v4 2 290 1 306 0.7371 0.786
AF-Q9HTZ2-F1-model_v4 4 291 1 295 0.7367 0.7765
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A193C563-F1-model_v4 GT2 1 289 335 645 0.5053 0.738
AF-R4T1S0-F1-model_v4 GT2 1 289 336 644 0.5043 0.7367
AF-A0A075UWS8-F1-model_v4 GT2 1 289 336 645 0.5036 0.7355
AF-A0A1H2I7W0-F1-model_v4 GT2 1 289 336 644 0.5034 0.7355
M2QHQ6 GT2 1 289 336 645 0.5025 0.7338
AF-A0A2L0EWE4-F1-model_v4 GT2 , GT25 1 289 761 1076 0.4749 0.7615
AF-A0A7U2MMF9-F1-model_v4 GT69 3 275 20 349 0.471 0.7085
AF-A0A7G5J2Y3-F1-model_v4 GT69 3 275 20 349 0.4616 0.7071
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A7D4BHE6 GT4 2 291 1 357 0.5277 0.7671
E1R851 GT2 2 291 238 556 0.5105 0.724
M2QHQ6 GT2 1 289 336 645 0.5025 0.7338
A0A2L0EWE4 GT2 , GT25 1 289 761 1076 0.4749 0.7615
A0A7G5J2Y3 GT69 3 275 20 349 0.4616 0.7071
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3vpd-assembly1.cif.gz_B-2 4 290 1 268 0.7742 0.8275
3vpc-assembly1.cif.gz_C 4 291 1 275 0.7717 0.8155
5k2m-assembly2.cif.gz_D 4 290 1 270 0.7666 0.8167
5d8d-assembly3.cif.gz_D 1 289 4 284 0.7662 0.8102
7qys-assembly1.cif.gz_B 4 291 1 281 0.763 0.7989
5i47-assembly1.cif.gz_B 4 287 1 264 0.7621 0.8222
7qys-assembly2.cif.gz_H 4 291 1 284 0.7615 0.793
5i47-assembly1.cif.gz_A 4 286 1 258 0.7615 0.8303
3vpd-assembly1.cif.gz_A-2 5 290 1 281 0.761 0.7955
7qyr-assembly2.cif.gz_H 4 287 1 279 0.7592 0.7964
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q970U6-F1-model_v4 4 291 1 282 0.7665 0.799
AF-P45241-F1-model_v4 4 291 1 301 0.7648 0.8043
AF-Q976J9-F1-model_v4 4 289 1 285 0.7627 0.7911
AF-Q4J8E7-F1-model_v4 4 291 1 282 0.7623 0.7954
AF-A5UEH4-F1-model_v4 4 291 1 301 0.7599 0.799
AF-Q5SH23-F1-model_v4 5 291 1 280 0.7567 0.7919
AF-Q58037-F1-model_v4 4 289 1 291 0.7565 0.788
AF-P47258-F1-model_v4 3 283 1 287 0.7557 0.7962
AF-Q3BQ65-F1-model_v4 4 291 1 294 0.7554 0.7875
AF-Q4QKP3-F1-model_v4 4 291 1 301 0.7545 0.7938
Download Full SwissProt Results