PROTEIN: HRGMv2_3996_188_11
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Protein File & Metadata
Source:
HRGMv2_3996_188_11.pdb
Genome ID:
Protein ID:
HRGMv2_3996_188_11
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Protein Sequence
MNYELLCVAL YAFSIENATA QTDTAKEPVV NGSVMVEVNY GHHTHRHHPV VWDFPHILAE 60 GTARLGRGWS LEANVEYERF RENGAWDNNA RNDYHTNLLA LTRQTSLGHD RSMRLGLGIV 120 PVPLGITNSG GPALTIYDPI SESEIMPMTW HDGGITAEVQ AGYWKLTTGL YIYGRAPLSD 180 SRVAGGAARL DFRLPQGLNV GASCYYGNTY AGQLATDIGA PEGKRHEFYS VFDFFYAVHG 240 LTIDGSAVYS QAQNKNTYGV EAGLNVLQNV TANMQLSPYA RYDGIFDHRE QTIHRYTLGI 300 DFVPIDGLTM KTELAWHHES RLPTSCQMRF GIGYAVAF 338
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9S4Z2-F1-model_v4 | 21 | 336 | 36 | 377 | 0.7265 |
0.8309 |
| AF-A0A0H3GP71-F1-model_v4 | 21 | 336 | 35 | 381 | 0.7253 |
0.8328 |
| AF-P37432-F1-model_v4 | 24 | 336 | 27 | 363 | 0.7201 |
0.8161 |
| AF-P30705-F1-model_v4 | 25 | 336 | 26 | 350 | 0.7198 |
0.8073 |
| AF-P02932-F1-model_v4 | 25 | 336 | 27 | 351 | 0.7195 |
0.8075 |
| AF-A0A0H3GIV3-F1-model_v4 | 25 | 336 | 27 | 350 | 0.7192 |
0.8055 |
| AF-P37592-F1-model_v4 | 22 | 336 | 3 | 362 | 0.7148 |
0.8064 |
| AF-Q32E50-F1-model_v4 | 25 | 336 | 28 | 362 | 0.7141 |
0.8133 |
| AF-P02931-F1-model_v4 | 25 | 336 | 28 | 362 | 0.714 |
0.8131 |
| AF-Q8ZPH7-F1-model_v4 | 22 | 336 | 3 | 372 | 0.7086 |
0.8102 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3wi5-assembly1.cif.gz_A | 29 | 336 | 1 | 312 | 0.7431 |
0.7983 |
| 6ehe-assembly1.cif.gz_A | 26 | 336 | 1 | 302 | 0.7373 |
0.7978 |
| 5nxn-assembly1.cif.gz_C | 24 | 336 | 5 | 342 | 0.7372 |
0.8145 |
| 1pho-assembly1.cif.gz_A | 25 | 336 | 6 | 330 | 0.7369 |
0.8047 |
| 4kr4-assembly1.cif.gz_C | 25 | 336 | 4 | 334 | 0.7363 |
0.8082 |
| 4kra-assembly1.cif.gz_C | 26 | 336 | 6 | 337 | 0.7362 |
0.8137 |
| 5o78-assembly1.cif.gz_C | 26 | 336 | 1 | 331 | 0.7359 |
0.807 |
| 4kra-assembly1.cif.gz_B | 25 | 336 | 6 | 340 | 0.7357 |
0.814 |
| 6ene-assembly1.cif.gz_C | 25 | 336 | 6 | 329 | 0.7356 |
0.8031 |
| 4d65-assembly2.cif.gz_F | 25 | 336 | 6 | 343 | 0.7352 |
0.8175 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P57042-F1-model_v4 | 21 | 336 | 12 | 329 | 0.7404 |
0.7959 |
| AF-P30689-F1-model_v4 | 21 | 336 | 12 | 331 | 0.7398 |
0.7976 |
| AF-P30690-F1-model_v4 | 22 | 336 | 13 | 331 | 0.739 |
0.7994 |
| AF-P29739-F1-model_v4 | 24 | 336 | 25 | 326 | 0.7389 |
0.8254 |
| AF-P30687-F1-model_v4 | 22 | 336 | 13 | 331 | 0.7386 |
0.7989 |
| AF-P30688-F1-model_v4 | 22 | 336 | 13 | 331 | 0.7381 |
0.7984 |
| AF-P30691-F1-model_v4 | 22 | 336 | 13 | 337 | 0.7337 |
0.8013 |
| AF-P30692-F1-model_v4 | 19 | 337 | 11 | 357 | 0.7233 |
0.8032 |
| AF-Q01606-F1-model_v4 | 25 | 336 | 27 | 349 | 0.7224 |
0.8088 |
| AF-P30704-F1-model_v4 | 25 | 336 | 27 | 351 | 0.721 |
0.8087 |