PROTEIN: HRGMv2_3996_120_44
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Protein File & Metadata
Source:
HRGMv2_3996_120_44.pdb
Genome ID:
Protein ID:
HRGMv2_3996_120_44
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Protein Sequence
MNHESRVRKS LLNARVNLVF YFIFVILSFF SRKTFLECLG AEFMGLSGTL INILGFLSLA 60 EMGVGTAVAY NLYKPLQQGN KERIEELVSV FGYLYNRIGL FILLGAGIVS CFIPLIFKHT 120 EFSFGLIYFA FFSILIAQLF SYFINYRQII LTADQKGYLV TGYLQGAQFC KIVLQMAIAY 180 YWGNYYAWIA LEVVFGFVGC IVLNRKIDQV YPWLKASVKK GKKFFPQNKQ IITYTKQVFV 240 HKIKDFLLSQ SDQILVFAFV SLKMVAYYGN YTLVVSRLSA AFDSALNSFS AGVGNLVAEG 300 NKEKSMSVFW EIVAVRFLVG GFVVFSVFNL IEPFISLWLG SKYILDREIL ILLMITIFIT 360 QTRGAVDMFN GAHGLYSDTW AAWAEAILFL AVTLALAPKY GIVGILAGKI VSQLLIIVIW 420 KPIFLFRKGF KEPISKYWKR ISIYYLLAIV GIVGATILCR PIVNSAFGGI VNWCVSALEI 480 TLPFAVFYVA VLYFFAPGAK PLFVRLYKIV RKQ 513
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 3 | 513 | 1 | 476 | 0.8505 |
0.8977 |
| AF-Q58467-F1-model_v4 | 3 | 513 | 1 | 507 | 0.8477 |
0.8711 |
| AF-A0A0H3GSJ3-F1-model_v4 | 4 | 513 | 1 | 477 | 0.8344 |
0.8825 |
| AF-Q8DPI1-F1-model_v4 | 3 | 513 | 1 | 491 | 0.8339 |
0.8717 |
| AF-H9L497-F1-model_v4 | 4 | 513 | 1 | 483 | 0.8285 |
0.8784 |
| AF-P77377-F1-model_v4 | 4 | 513 | 1 | 483 | 0.8263 |
0.8763 |
| AF-Q32ET1-F1-model_v4 | 6 | 512 | 1 | 511 | 0.8126 |
0.8403 |
| AF-P0AF16-F1-model_v4 | 6 | 509 | 1 | 511 | 0.8121 |
0.8445 |
| AF-Q9HVM2-F1-model_v4 | 5 | 509 | 1 | 512 | 0.8095 |
0.8414 |
| AF-A0A0H3GRG5-F1-model_v4 | 6 | 512 | 1 | 511 | 0.8079 |
0.836 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 4 | 513 | 1 | 512 | 0.8391 |
0.8639 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 3 | 513 | 35 | 545 | 0.7981 |
0.8428 |
| QNU38870.1 | GT4 | 7 | 513 | 1 | 475 | 0.7308 |
0.8625 |
| QJC17489.1 | GT2 | 1 | 513 | 128 | 843 | 0.688 |
0.8634 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 3 | 513 | 2 | 566 | 0.6763 |
0.8524 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 3 | 513 | 1 | 593 | 0.6708 |
0.8643 |
| AF-D1BIF1-F1-model_v4 | GT4 | 4 | 513 | 6 | 644 | 0.6631 |
0.8745 |
| AF-A1R6N5-F1-model_v4 | GT2 | 1 | 513 | 3 | 497 | 0.6536 |
0.8485 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 1 | 513 | 14 | 521 | 0.6521 |
0.8276 |
| A0A0C5BEZ8 | GT4 | 8 | 513 | 1 | 894 | 0.6483 |
0.8402 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 4 | 513 | 1 | 512 | 0.8391 |
0.8639 |
| A0A160T2N7 | GT28 | 3 | 513 | 35 | 545 | 0.7981 |
0.8428 |
| QNU38870.1 | GT4 | 7 | 513 | 1 | 475 | 0.7308 |
0.8625 |
| QJC17489.1 | GT2 | 1 | 513 | 128 | 843 | 0.688 |
0.8634 |
| A0A3T0RPT8 | GT4 | 3 | 513 | 2 | 566 | 0.6763 |
0.8524 |
| A0A3Q9G719 | GT4 | 3 | 513 | 1 | 593 | 0.6708 |
0.8643 |
| D1BIF1 | GT4 | 4 | 513 | 6 | 644 | 0.6631 |
0.8745 |
| F9ZKY1 | GT2 | 1 | 513 | 14 | 521 | 0.6521 |
0.8276 |
| A0A0C5BEZ8 | GT4 | 8 | 513 | 1 | 894 | 0.6483 |
0.8402 |
| A0A2U8PPB3 | GT4 | 7 | 513 | 1 | 566 | 0.6464 |
0.8164 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 11 | 506 | 1 | 496 | 0.7972 |
0.8303 |
| 7wag-assembly1.cif.gz_A | 10 | 509 | 4 | 513 | 0.7656 |
0.8124 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 7 | 513 | 1 | 499 | 0.861 |
0.8949 |
| AF-Q58467-F1-model_v4 | 3 | 513 | 1 | 507 | 0.8477 |
0.8711 |
| AF-Q48457-F1-model_v4 | 4 | 513 | 1 | 484 | 0.8409 |
0.8839 |
| AF-P77377-F1-model_v4 | 4 | 513 | 1 | 483 | 0.8263 |
0.8763 |
| AF-D4GYG8-F1-model_v4 | 6 | 513 | 1 | 476 | 0.8236 |
0.8725 |
| AF-O32273-F1-model_v4 | 3 | 513 | 1 | 482 | 0.8223 |
0.8666 |
| AF-D4GU68-F1-model_v4 | 4 | 513 | 1 | 472 | 0.822 |
0.8744 |
| AF-O34238-F1-model_v4 | 4 | 509 | 4 | 525 | 0.8202 |
0.8579 |
| AF-B4E9G3-F1-model_v4 | 4 | 509 | 1 | 516 | 0.8135 |
0.8468 |
| AF-O83529-F1-model_v4 | 3 | 513 | 1 | 526 | 0.8132 |
0.8469 |