PROTEIN: HRGMv2_3992_161_39
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Protein File & Metadata
Source:
HRGMv2_3992_161_39.pdb
Genome ID:
Protein ID:
HRGMv2_3992_161_39
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Protein Sequence
MEQNVISVTC GAKYRNYPFY NWMPKPLGII LLILLFIPIL TVGGVYTANS GDMTSGLGIQ 60 SEHIQFVGFV TSIGMAAFSP FFYQLVCIRR EKMMCVVGFS IMYLLSYVCA VTDSIFVLAL 120 CSLVMGFLRM ELMMVNLFTL IRYAFGMEAT QNITPGNEPD TEEGWDRLDS EKSKSMPMIY 180 LFFMILGQLG TSLTAWLAYE YQWQDVYYYM MGMTLVAILI VLVTMPYHAY NNRRFPITFR 240 KFGNVAVFSS MMTCGIYVLV YGKTLDWFAD PTIVRSTILT VVFAAVFFYM EWSHRSPYFL 300 MEVFRLRTIN MGIVLFLLLM IFNTSSMFVN VFTGVGMEID NWQNASLGNW SMLGYFIGAV 360 IAIILGSRNV KLKYLFGIGF MLIGMSALFM YFEVQTAGLY ERMKYPVIIR SAGMMLIYSL 420 TAVYANQRMP YKYLSTWICI MLSVRMVIGP GIGSALYSNV LQHRQQHYVT MFAQDVDRVD 480 TQTAAAYDQT VNGMRWQGRS ETEAENMAAM SAKGKVQVQA TLSAVKEMSG WTFYGCMLSM 540 LFVLIYPYKK RNLSAWRN 558
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GNL5-F1-model_v4 | 1 | 553 | 2 | 520 | 0.8201 |
0.8676 |
| AF-P0AEJ0-F1-model_v4 | 7 | 554 | 1 | 507 | 0.8152 |
0.8745 |
| AF-P52600-F1-model_v4 | 4 | 553 | 1 | 508 | 0.8134 |
0.871 |
| AF-Q32DH7-F1-model_v4 | 4 | 552 | 1 | 507 | 0.8039 |
0.8632 |
| AF-Q5F680-F1-model_v4 | 8 | 553 | 1 | 502 | 0.7992 |
0.8615 |
| AF-A0A0H3GSP9-F1-model_v4 | 5 | 552 | 11 | 538 | 0.7853 |
0.8389 |
| AF-Q8ZMK8-F1-model_v4 | 5 | 557 | 1 | 509 | 0.7807 |
0.8365 |
| AF-A0A0H3GU91-F1-model_v4 | 5 | 556 | 1 | 509 | 0.7798 |
0.8355 |
| AF-Q9I008-F1-model_v4 | 1 | 553 | 11 | 523 | 0.7793 |
0.8419 |
| AF-Q9I4A2-F1-model_v4 | 15 | 550 | 8 | 503 | 0.7743 |
0.8411 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 11 | 558 | 9 | 541 | 0.7268 |
0.776 |
| ARF89445.1 | GT1 | 4 | 552 | 65 | 952 | 0.6298 |
0.8126 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 13 | 558 | 19 | 473 | 0.621 |
0.7238 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 14 | 558 | 31 | 541 | 0.5845 |
0.8076 |
| AF-A0A8A3PDC7-F1-model_v4 | CE0 | 1 | 558 | 129 | 834 | 0.5311 |
0.6428 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 558 | 294 | 768 | 0.5304 |
0.7233 |
| AF-W8VNY0-F1-model_v4 | GH17 | 17 | 557 | 9 | 466 | 0.5239 |
0.7362 |
| A0A9Q9RZ67 | GH78 | 2 | 558 | 731 | 1461 | 0.5134 |
0.7488 |
| F9G000 | GH3 | 1 | 557 | 38 | 562 | 0.4961 |
0.7584 |
| AF-A0A7H8QT70-F1-model_v4 | GH27 | 4 | 558 | 37 | 757 | 0.4955 |
0.649 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 11 | 558 | 9 | 541 | 0.7268 |
0.776 |
| ARF89445.1 | GT1 | 4 | 552 | 65 | 952 | 0.6298 |
0.8126 |
| A0A387HHJ8 | GT1 | 14 | 558 | 31 | 541 | 0.5845 |
0.8076 |
| A0A7H8RF34 | CBM24 | 1 | 558 | 294 | 768 | 0.5304 |
0.7233 |
| A0A9Q9RZ67 | GH78 | 2 | 558 | 731 | 1461 | 0.5134 |
0.7488 |
| A0A918L8E6 | GT2 | 24 | 558 | 2 | 483 | 0.5117 |
0.6506 |
| F9G000 | GH3 | 1 | 557 | 38 | 562 | 0.4961 |
0.7584 |
| A0A7H8QT70 | GH27 | 4 | 558 | 37 | 757 | 0.4955 |
0.649 |
| S5VEU6 | CE14 | 15 | 558 | 20 | 788 | 0.4918 |
0.602 |
| A0A8S2B775 | GT5 | 5 | 558 | 215 | 919 | 0.4826 |
0.6121 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 9 | 550 | 1 | 483 | 0.7332 |
0.8029 |
| 7y58-assembly1.cif.gz_A | 8 | 552 | 4 | 505 | 0.7274 |
0.7897 |
| 8pnl-assembly2.cif.gz_C | 9 | 550 | 1 | 486 | 0.7224 |
0.7896 |
| 7d5p-assembly1.cif.gz_A | 25 | 550 | 1 | 408 | 0.6951 |
0.8164 |
| 7d5p-assembly2.cif.gz_B | 17 | 550 | 1 | 413 | 0.6931 |
0.8104 |
| 7d5q-assembly2.cif.gz_B | 17 | 550 | 1 | 411 | 0.6914 |
0.8103 |
| 8b1j-assembly1.cif.gz_A | 24 | 553 | 1 | 451 | 0.6906 |
0.7793 |
| 7d5q-assembly1.cif.gz_A | 17 | 550 | 1 | 403 | 0.6904 |
0.8143 |
| 6gs7-assembly1.cif.gz_A | 24 | 553 | 2 | 471 | 0.674 |
0.749 |
| 6gs4-assembly1.cif.gz_A | 24 | 554 | 2 | 468 | 0.6734 |
0.7508 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AEJ1-F1-model_v4 | 7 | 556 | 1 | 508 | 0.8179 |
0.8756 |
| AF-P0AEJ0-F1-model_v4 | 7 | 554 | 1 | 507 | 0.8152 |
0.8745 |
| AF-P52600-F1-model_v4 | 4 | 553 | 1 | 508 | 0.8134 |
0.871 |
| AF-P44927-F1-model_v4 | 3 | 553 | 1 | 508 | 0.8098 |
0.8665 |
| AF-Q9RQ29-F1-model_v4 | 8 | 553 | 1 | 502 | 0.8041 |
0.8661 |
| AF-P0DPR7-F1-model_v4 | 9 | 552 | 7 | 512 | 0.7963 |
0.8563 |
| AF-P37594-F1-model_v4 | 15 | 553 | 1 | 495 | 0.7681 |
0.8299 |
| AF-D0ZXQ3-F1-model_v4 | 15 | 552 | 1 | 495 | 0.7643 |
0.8263 |
| AF-P94574-F1-model_v4 | 15 | 553 | 1 | 452 | 0.7615 |
0.8559 |
| AF-P9WJW9-F1-model_v4 | 15 | 553 | 1 | 508 | 0.7591 |
0.8118 |