PROTEIN: HRGMv2_3990_5_16
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Protein File & Metadata
Source:
HRGMv2_3990_5_16.pdb
Genome ID:
Protein ID:
HRGMv2_3990_5_16
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Protein Sequence
MKILLLGEYS NVHATLADGL RALGHTVTVA SNGDFWKDYP ADISLKRKPG KLGGISLMLK 60 VWALMHKFTG YDIVQLINPM FMELKAERLF GIYDYLKKHN RAVVLGAYGM DWYWVKTCSH 120 DMPLRYSDFN IGKQLRTNAD AVREQKDWMG TAKERLNRKI ADECDGIVAG LYEYWVCYKD 180 VFKDKTTFIP FPIKPQGVKP KAKGEKLKIF IGINKSRSEY KGTDIMLKAA EAVKANYPER 240 VELEVAESVP FAVYEKMMNS SDVILDQLYS YTPAMNALLA MSKGIICVGG GEEENYGIIN 300 ENELRPIVNV TPSYQSVYDS LKRLATMPDD EIMSLKRQSI EYTRRHHDYI KVAQQYADFY 360 VNILSRKDKM QRV 373
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-X8F0S0-F1-model_v4 | 1 | 371 | 4 | 351 | 0.759 |
0.8069 |
| AF-A0A0H3GSJ8-F1-model_v4 | 1 | 368 | 4 | 353 | 0.7346 |
0.7807 |
| AF-Q59002-F1-model_v4 | 1 | 371 | 1 | 390 | 0.7166 |
0.7546 |
| AF-Q9HTC0-F1-model_v4 | 1 | 373 | 1 | 377 | 0.7066 |
0.7329 |
| AF-Q0P9C5-F1-model_v4 | 1 | 367 | 2 | 359 | 0.7065 |
0.7436 |
| AF-P9WMZ1-F1-model_v4 | 1 | 365 | 1 | 387 | 0.7036 |
0.7501 |
| AF-O05083-F1-model_v4 | 1 | 360 | 2 | 353 | 0.7016 |
0.7444 |
| AF-K0EX89-F1-model_v4 | 1 | 368 | 1 | 366 | 0.7012 |
0.7305 |
| AF-X8F1I4-F1-model_v4 | 8 | 373 | 1 | 387 | 0.6999 |
0.7615 |
| AF-G3XD85-F1-model_v4 | 1 | 371 | 2 | 373 | 0.6982 |
0.7273 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A8F9RKQ6 | GT4 | 1 | 367 | 1 | 365 | 0.9302 |
0.9495 |
| AF-A0A345H6Z6-F1-model_v4 | GT0 | 1 | 370 | 1 | 386 | 0.9093 |
0.9425 |
| AF-A0A7L4ZIJ9-F1-model_v4 | GT0 | 1 | 369 | 1 | 384 | 0.9084 |
0.9415 |
| UZO80829.1 | GT0 | 1 | 373 | 1 | 390 | 0.9077 |
0.9391 |
| WDG00261.1 | GT0 | 1 | 363 | 1 | 356 | 0.9045 |
0.9375 |
| BCN22213.1 | GT4 | 1 | 363 | 1 | 355 | 0.9002 |
0.9348 |
| AF-A0A3A9XA44-F1-model_v4 | GT0 | 1 | 364 | 1 | 381 | 0.8995 |
0.942 |
| AF-A0A2S1Q8F1-F1-model_v4 | GT0 | 1 | 362 | 1 | 377 | 0.8984 |
0.9406 |
| AF-A0A6G7RRB4-F1-model_v4 | GT0 | 1 | 363 | 1 | 381 | 0.8981 |
0.9424 |
| AF-A0A7U2NHS6-F1-model_v4 | GT0 | 1 | 363 | 1 | 378 | 0.8976 |
0.9388 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A8F9RKQ6 | GT4 | 1 | 367 | 1 | 365 | 0.9302 |
0.9495 |
| BCN22213.1 | GT4 | 1 | 363 | 1 | 355 | 0.9002 |
0.9348 |
| A0A6A1RNH8 | GT4 | 1 | 365 | 1 | 381 | 0.868 |
0.9107 |
| A0A0U2W3G6 | GT4 | 1 | 368 | 1 | 332 | 0.8439 |
0.9075 |
| ASG66426.1 | GT4 | 1 | 364 | 1 | 346 | 0.8381 |
0.8853 |
| QOT08100.1 | GT4 | 1 | 363 | 1 | 337 | 0.8375 |
0.8967 |
| A0A7T5EX02 | GT4 | 3 | 367 | 1 | 328 | 0.8357 |
0.9042 |
| A0A0U2LFQ4 | GT4 | 1 | 371 | 5 | 344 | 0.8351 |
0.8942 |
| A0A930BJB7 | GT4 | 1 | 365 | 1 | 339 | 0.829 |
0.9006 |
| A0A0U2MI87 | GT4 | 1 | 363 | 1 | 331 | 0.8243 |
0.89 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3mbo-assembly3.cif.gz_E | 1 | 369 | 2 | 375 | 0.7167 |
0.7459 |
| 3mbo-assembly1.cif.gz_A | 1 | 368 | 3 | 372 | 0.7167 |
0.7455 |
| 6n1x-assembly1.cif.gz_A | 1 | 366 | 5 | 377 | 0.7146 |
0.7514 |
| 3mbo-assembly4.cif.gz_G | 1 | 371 | 2 | 365 | 0.7095 |
0.7393 |
| 6ejj-assembly1.cif.gz_A | 1 | 367 | 3 | 360 | 0.7024 |
0.7412 |
| 3c4q-assembly2.cif.gz_B | 1 | 367 | 1 | 393 | 0.7005 |
0.7488 |
| 3c4q-assembly1.cif.gz_A | 1 | 367 | 1 | 393 | 0.6976 |
0.7458 |
| 5d01-assembly1.cif.gz_B | 1 | 364 | 3 | 360 | 0.6951 |
0.7314 |
| 6kih-assembly2.cif.gz_B | 1 | 368 | 2 | 399 | 0.6927 |
0.7442 |
| 8fbx-assembly2.cif.gz_B | 1 | 371 | 2 | 303 | 0.6919 |
0.7827 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P54490-F1-model_v4 | 1 | 371 | 1 | 359 | 0.731 |
0.7631 |
| AF-B8HCF8-F1-model_v4 | 1 | 373 | 4 | 416 | 0.7205 |
0.7789 |
| AF-A4QB40-F1-model_v4 | 1 | 373 | 1 | 415 | 0.7187 |
0.7761 |
| AF-A0JZ09-F1-model_v4 | 1 | 373 | 4 | 416 | 0.7178 |
0.7771 |
| AF-Q8NTA6-F1-model_v4 | 1 | 373 | 1 | 415 | 0.7166 |
0.7741 |
| AF-Q59002-F1-model_v4 | 1 | 371 | 1 | 390 | 0.7166 |
0.7546 |
| AF-A1R8N8-F1-model_v4 | 3 | 373 | 1 | 408 | 0.7159 |
0.7693 |
| AF-C6WPK3-F1-model_v4 | 1 | 373 | 1 | 417 | 0.7149 |
0.7717 |
| AF-Q48453-F1-model_v4 | 1 | 364 | 1 | 358 | 0.7145 |
0.7522 |
| AF-C7R101-F1-model_v4 | 1 | 372 | 8 | 424 | 0.713 |
0.7762 |