PROTEIN: HRGMv2_3990_12_9
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Protein File & Metadata
Source:
HRGMv2_3990_12_9.pdb
Genome ID:
Protein ID:
HRGMv2_3990_12_9
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Protein Sequence
MDTNSRRIAK NTLLLYVRML FTMAIGLYTS RVVLNTLGVT DYGIYNVVGG VISLLGFITS 60 SMAGASSRYI TYDLGKGDIA VMKRTFGNII SIHFVLAGVV FLVGETLGLW FVLNKLQIPS 120 ERMTAAFWVY QFSVFSAILG VVSVPYNAAI IAHERMKAFA YIGIVDALLK LLIVYLLLVV 180 PYDKLIVYAM LLFCVQVFDR VVYGWYCVRN FEEARAKCTF DKGLFKKIFG FAAWTMNGNL 240 AIIGYTQGIN ILLNLFFGPA VNAARGVAVQ VQGVAQSFCG NFQTALNPQL TKSYAQNDLH 300 RMHKLLTQSS KFSFFLLFLI ALPVMFEAPL VLGWWLGIVP EHTVNFLRLI LCSSMLATLS 360 NPLIVSVHAT GSIKKFQIVE GTMLLSIVPI AYLLLKLFSI RPEYVFFVHI IIEMLTQYAR 420 MRIVLPMISM RIGCYVKDVV LPIFKVLVVA PVLPLCLYVV MRQSVGAFFI VCSISLMAVS 480 LAVYFVGCTK GEQEYIKRLV SEKIKVNG 508
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DPI1-F1-model_v4 | 3 | 508 | 1 | 493 | 0.8674 |
0.8965 |
| AF-A0A0H3GSJ3-F1-model_v4 | 3 | 505 | 1 | 478 | 0.8621 |
0.9036 |
| AF-Q58467-F1-model_v4 | 2 | 506 | 1 | 506 | 0.8587 |
0.8805 |
| AF-Q2G262-F1-model_v4 | 2 | 506 | 1 | 476 | 0.8571 |
0.8996 |
| AF-H9L497-F1-model_v4 | 2 | 508 | 1 | 487 | 0.8563 |
0.8954 |
| AF-P77377-F1-model_v4 | 2 | 508 | 1 | 488 | 0.8439 |
0.8824 |
| AF-Q32ET1-F1-model_v4 | 4 | 499 | 1 | 509 | 0.8253 |
0.8652 |
| AF-P37169-F1-model_v4 | 1 | 499 | 9 | 522 | 0.8246 |
0.8694 |
| AF-P0AF16-F1-model_v4 | 4 | 499 | 1 | 509 | 0.8223 |
0.8625 |
| AF-Q2FXH6-F1-model_v4 | 2 | 505 | 1 | 550 | 0.8179 |
0.875 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 2 | 500 | 1 | 504 | 0.855 |
0.8912 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 503 | 36 | 544 | 0.8061 |
0.8586 |
| QNU38870.1 | GT4 | 5 | 508 | 1 | 480 | 0.7593 |
0.8826 |
| QJC17489.1 | GT2 | 1 | 508 | 338 | 848 | 0.72 |
0.9061 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 3 | 506 | 1 | 592 | 0.6822 |
0.8847 |
| AF-D1BIF1-F1-model_v4 | GT4 | 3 | 508 | 7 | 659 | 0.6795 |
0.8971 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 508 | 1 | 615 | 0.6736 |
0.8492 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 8 | 508 | 1 | 616 | 0.6665 |
0.8461 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 1 | 499 | 28 | 513 | 0.6643 |
0.8736 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 508 | 5 | 671 | 0.6613 |
0.8426 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 2 | 500 | 1 | 504 | 0.855 |
0.8912 |
| A0A160T2N7 | GT28 | 1 | 503 | 36 | 544 | 0.8061 |
0.8586 |
| QNU38870.1 | GT4 | 5 | 508 | 1 | 480 | 0.7593 |
0.8826 |
| QJC17489.1 | GT2 | 1 | 508 | 338 | 848 | 0.72 |
0.9061 |
| A0A3Q9G719 | GT4 | 3 | 506 | 1 | 592 | 0.6822 |
0.8847 |
| D1BIF1 | GT4 | 3 | 508 | 7 | 659 | 0.6795 |
0.8971 |
| A0A3T0RPT8 | GT4 | 1 | 508 | 1 | 615 | 0.6736 |
0.8492 |
| A0A2U8PPB3 | GT4 | 8 | 508 | 1 | 616 | 0.6665 |
0.8461 |
| F9ZKY1 | GT2 | 1 | 499 | 28 | 513 | 0.6643 |
0.8736 |
| A0A517Z2I8 | GT2 | 1 | 508 | 5 | 671 | 0.6613 |
0.8426 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 14 | 496 | 1 | 496 | 0.8262 |
0.8744 |
| 6nc6-assembly2.cif.gz_B | 9 | 497 | 1 | 461 | 0.8072 |
0.8634 |
| 7wag-assembly1.cif.gz_A | 1 | 499 | 1 | 509 | 0.8031 |
0.847 |
| 6cc4-assembly1.cif.gz_A | 1 | 503 | 40 | 608 | 0.7709 |
0.8603 |
| 6fhz-assembly1.cif.gz_A | 8 | 432 | 8 | 436 | 0.7684 |
0.8655 |
| 4mlb-assembly1.cif.gz_C | 2 | 430 | 3 | 448 | 0.6755 |
0.7706 |
| 6hfb-assembly3.cif.gz_C | 2 | 430 | 4 | 447 | 0.6726 |
0.7671 |
| 6gwh-assembly1.cif.gz_A | 2 | 430 | 2 | 435 | 0.6683 |
0.7541 |
| 3wbn-assembly1.cif.gz_A | 3 | 430 | 3 | 446 | 0.6654 |
0.7601 |
| 6z70-assembly1.cif.gz_A | 2 | 430 | 2 | 439 | 0.6626 |
0.7499 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 6 | 508 | 1 | 504 | 0.8985 |
0.9198 |
| AF-Q58467-F1-model_v4 | 2 | 506 | 1 | 506 | 0.8587 |
0.8805 |
| AF-Q48457-F1-model_v4 | 2 | 506 | 1 | 484 | 0.8565 |
0.8951 |
| AF-P77377-F1-model_v4 | 2 | 508 | 1 | 488 | 0.8439 |
0.8824 |
| AF-P33699-F1-model_v4 | 2 | 506 | 4 | 486 | 0.8387 |
0.8858 |
| AF-O83529-F1-model_v4 | 2 | 507 | 1 | 526 | 0.8342 |
0.8695 |
| AF-O34238-F1-model_v4 | 1 | 498 | 3 | 524 | 0.8334 |
0.8801 |
| AF-O32273-F1-model_v4 | 1 | 507 | 1 | 483 | 0.8325 |
0.8724 |
| AF-O67658-F1-model_v4 | 5 | 508 | 1 | 496 | 0.829 |
0.8606 |
| AF-O34674-F1-model_v4 | 2 | 505 | 1 | 541 | 0.8266 |
0.8771 |