PROTEIN: HRGMv2_3990_12_14
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Protein File & Metadata
Source:
HRGMv2_3990_12_14.pdb
Genome ID:
Protein ID:
HRGMv2_3990_12_14
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Protein Sequence
MYKGYKIVVN TAAGRRRYMR FLVPQVLTAE IVDRYDIWIN THDILDIEFF KELAKKYDKV 60 NLVWQPDGVV DGISTINAFY RSCCDEDAIY MKLDDDVIWL EPCLFEKMVK FRIDNPEYFL 120 VSPLVINNAL STYLLQVQGK IKLDKYYMSM CAERTLCLDG WFAADLHDWF IENYLKPETY 180 EKLYVGKHPM GMTRFSINCI LWFGKDMASF KGEVTGDDEE FLSCIKPTQL GRCNCFNGDA 240 IVSHFAFGPQ RKALESTAVL KRYEDVLHTL WQQDAKLHET YLDVERIISD VESRSAQLER 300 LKSPYKVVSH AKVPIMLKLG KKLPDNVRAA IRELQRRQKY KFIVR 345
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C0NZA9-F1-model_v4 | 1 | 282 | 69 | 411 | 0.6674 |
0.9008 |
| AF-C0NWW0-F1-model_v4 | 1 | 285 | 79 | 425 | 0.6641 |
0.8901 |
| AF-C1H7H9-F1-model_v4 | 1 | 285 | 93 | 435 | 0.6578 |
0.8904 |
| AF-C1HDV8-F1-model_v4 | 1 | 286 | 71 | 414 | 0.6556 |
0.8857 |
| AF-A0A1C1CRS5-F1-model_v4 | 1 | 282 | 115 | 462 | 0.6388 |
0.8961 |
| AF-C1HAE4-F1-model_v4 | 1 | 277 | 82 | 461 | 0.6329 |
0.905 |
| AF-K0F8C8-F1-model_v4 | 1 | 313 | 4 | 284 | 0.5821 |
0.6591 |
| AF-A0A133CI93-F1-model_v4 | 1 | 310 | 3 | 248 | 0.5808 |
0.7193 |
| AF-P9WMX7-F1-model_v4 | 1 | 339 | 1 | 246 | 0.5495 |
0.6696 |
| AF-O24928-F1-model_v4 | 3 | 345 | 1 | 252 | 0.5492 |
0.6584 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A4P7H618-F1-model_v4 | GT2 | 1 | 314 | 4 | 288 | 0.5839 |
0.6575 |
| A0A7D6V9C3 | GT2 | 1 | 310 | 3 | 282 | 0.5826 |
0.66 |
| AF-A0A7D6V9C3-F1-model_v4 | GT2 | 1 | 310 | 3 | 282 | 0.5826 |
0.66 |
| AF-K0F8C8-F1-model_v4 | GT2 | 1 | 313 | 4 | 284 | 0.5822 |
0.6592 |
| A0A3E3K4D4 | GT2 | 1 | 336 | 4 | 295 | 0.5807 |
0.6473 |
| UVO98321.1 | GT2 | 2 | 336 | 1 | 290 | 0.5787 |
0.6452 |
| AF-Q5E8H6-F1-model_v4 | GT2 | 2 | 344 | 1 | 271 | 0.5772 |
0.6623 |
| AF-A0A6G9YSQ1-F1-model_v4 | GT2 | 1 | 313 | 4 | 283 | 0.577 |
0.6542 |
| A0A399RNW7 | GT2 | 2 | 330 | 1 | 274 | 0.5756 |
0.6557 |
| AF-A0A6G7ZXN0-F1-model_v4 | GT2 | 1 | 330 | 1 | 279 | 0.5752 |
0.6505 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A8A7K6J3 | GT2 | 6 | 313 | 1 | 236 | 0.5954 |
0.7903 |
| A0A2P1PVU2 | GT2 | 2 | 252 | 2 | 228 | 0.5893 |
0.7963 |
| A0A7D6V9C3 | GT2 | 1 | 310 | 3 | 282 | 0.5826 |
0.66 |
| A0A175AC26 | GT2 | 2 | 344 | 5 | 274 | 0.582 |
0.6742 |
| A0A974SBI8 | GT2 | 1 | 270 | 4 | 259 | 0.5808 |
0.6911 |
| A0A3E3K4D4 | GT2 | 1 | 336 | 4 | 295 | 0.5807 |
0.6473 |
| UVO98321.1 | GT2 | 2 | 336 | 1 | 290 | 0.5787 |
0.6452 |
| A0A7G6AC33 | GT2 | 2 | 340 | 2 | 271 | 0.5769 |
0.6635 |
| A0A399RNW7 | GT2 | 2 | 330 | 1 | 274 | 0.5756 |
0.6557 |
| QRY61549.1 | GT2 | 3 | 312 | 1 | 291 | 0.5753 |
0.639 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3pol-assembly1.cif.gz_A | 3 | 278 | 7 | 262 | 0.5517 |
0.6572 |
| 4xwi-assembly1.cif.gz_A | 3 | 269 | 1 | 252 | 0.5449 |
0.6467 |
| 5hea-assembly1.cif.gz_A | 2 | 321 | 1 | 256 | 0.5389 |
0.6554 |
| 8b31-assembly1.cif.gz_A | 5 | 272 | 1 | 271 | 0.5235 |
0.6257 |
| 2y4m-assembly1.cif.gz_A | 7 | 345 | 1 | 358 | 0.4724 |
0.5167 |
| 7ui6-assembly1.cif.gz_A | 1 | 301 | 1 | 409 | 0.4169 |
0.6065 |
| 6fxk-assembly1.cif.gz_A-2 | 2 | 296 | 239 | 532 | 0.4095 |
0.6259 |
| 6te3-assembly1.cif.gz_A | 2 | 296 | 241 | 534 | 0.4074 |
0.6279 |
| 6teu-assembly1.cif.gz_A | 1 | 293 | 242 | 536 | 0.4074 |
0.6311 |
| 6tez-assembly1.cif.gz_A | 2 | 296 | 252 | 545 | 0.4067 |
0.6309 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0LE62-F1-model_v4 | 5 | 272 | 1 | 250 | 0.5732 |
0.6804 |
| AF-P71054-F1-model_v4 | 1 | 345 | 1 | 272 | 0.5705 |
0.6595 |
| AF-O32268-F1-model_v4 | 1 | 344 | 2 | 252 | 0.5704 |
0.676 |
| AF-Q4KXC9-F1-model_v4 | 1 | 253 | 3 | 216 | 0.5633 |
0.7702 |
| AF-Q46635-F1-model_v4 | 6 | 345 | 1 | 266 | 0.5631 |
0.6514 |
| AF-B0VD12-F1-model_v4 | 6 | 271 | 1 | 253 | 0.5608 |
0.6631 |
| AF-B7H3M4-F1-model_v4 | 6 | 271 | 1 | 253 | 0.5606 |
0.6629 |
| AF-B1Z3N9-F1-model_v4 | 1 | 275 | 1 | 267 | 0.5603 |
0.6492 |
| AF-A8ZWH0-F1-model_v4 | 5 | 270 | 1 | 248 | 0.56 |
0.6674 |
| AF-A1APF8-F1-model_v4 | 5 | 270 | 1 | 255 | 0.5585 |
0.6583 |