PROTEIN: HRGMv2_3988_71_11
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Protein File & Metadata
Source:
HRGMv2_3988_71_11.pdb
Genome ID:
Protein ID:
HRGMv2_3988_71_11
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Protein Sequence
MAAMAVCGMG AMNAQLVDPS LNQTINNGEI FDVFMLDNAS VTTLQQEGKT VNLYTVDETT 60 RHMYIWDGTM VAGTPSNQVG VDFQTDGFSC FQVGTVGWSG LGLAVDEVAP IDLGHISDET 120 HFHMAVRPEG NAPAAIAVIF GDGTNSEYGM KWTPAKISVG SSAFVDNGVS YPLVGDFDRE 180 GGDWKAIDLT LGDLKKLFPS FAYLPGGFYG NIISVLAGGV AGTTFSMDAI YLYGPKAQGG 240 VEDVAADEAQ IVVSAKTISV LGGQEGIDVY NVSGQLVKSS ESTIVGVEDL TPGLYVVKAG 300 NAVKKVVIR 309
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UMY64911.1 | CBM0 | 18 | 309 | 369 | 625 | 0.4456 |
0.705 |
| AF-A0A7Z2W2E6-F1-model_v4 | CBM56 , GH16_3 | 28 | 243 | 303 | 484 | 0.3704 |
0.7746 |
| AF-A0A5P9EVB7-F1-model_v4 | GH16_3 | 2 | 264 | 79 | 660 | 0.3689 |
0.5887 |
| AF-A0A5B9P6X3-F1-model_v4 | GH17 | 28 | 236 | 436 | 607 | 0.3557 |
0.8021 |
| AF-A0A2S2DNS5-F1-model_v4 | CBM56 , GH16_3 | 28 | 242 | 327 | 505 | 0.3556 |
0.757 |
| UZP73529.1 | GH17 | 28 | 235 | 455 | 622 | 0.3491 |
0.8155 |
| AF-D0LSQ5-F1-model_v4 | CBM32 , GH16_3 | 1 | 241 | 312 | 689 | 0.3419 |
0.627 |
| UII19963.1 | GH128 , GH16_3 | 17 | 308 | 25 | 1677 | 0.3147 |
0.5651 |
| A0A5J6PDC5 | CBM32 , CBM6 , GH128 , GH16_3 | 1 | 237 | 261 | 632 | 0.3002 |
0.6364 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UAM97979.1 | CBM16 , GH128 | 25 | 309 | 259 | 769 | 0.4071 |
0.6288 |
| A0A5B9P6X3 | GH17 | 28 | 236 | 436 | 607 | 0.3557 |
0.8021 |
| UZP73529.1 | GH17 | 28 | 235 | 455 | 622 | 0.3491 |
0.8155 |
| D0LSQ5 | CBM32 , GH16_3 | 1 | 241 | 312 | 689 | 0.3419 |
0.627 |
| UII19963.1 | GH128 , GH16_3 | 17 | 308 | 25 | 1677 | 0.3147 |
0.5651 |
| A0A344THU4 | CBM8 , GH9 | 1 | 303 | 71 | 1388 | 0.3113 |
0.5239 |
| A0A5J6PDC5 | CBM32 , CBM6 , GH128 , GH16_3 | 1 | 237 | 261 | 632 | 0.3002 |
0.6364 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.