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PROTEIN: HRGMv2_3983_4_16

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_3983_4_16.pdb
Genome ID:
HRGMv2_3983
Protein ID:
HRGMv2_3983_4_16

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKFKVFASY   LVCAAFLLGV   ASCDNDTDFD   GGDTPADAPY   VVCLGITSNS   ATSYYVVPVS 60
DFMNGTISAS   GNQGIEQNGY   RSFQIGNSSI   FSIGGLGLTD   ANIITKGADG   KLQQKSSFVF 120
EQSLSGIEQA   DSENMVAVDI   PTAPTGGDQF   KMYLLNINSG   AITKKVTKPV   SELSTLDWPR 180
LTGMTVSDNK   IYITYYLTDE   TLKPSVTRHI   DKAYVAVYSY   PELEHITTME   DERAAIAGSW 240
NAYNGIFKTE   SGDMYTFSNT   SIANGFSQNS   SKKAAFLHIA   KGTTQFDDYY   FDVETEAGGL 300
KPVHLQYLGN   GKFFAQVSTL   QPDEMTRWAD   KSLKTCIIDV   KEKTVKDIPQ   IPVHDGDGGQ 360
RMSGVVDNGY   FYIPLATDGA   LYFYKVDINN   ATAERGAKVA   SNFVSATFKI   D 411
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H3GQT6-F1-model_v4 35 411 21 382 0.6648 0.7464
AF-A0A175VUS2-F1-model_v4 37 411 44 425 0.6234 0.7083
AF-Q55CT9-F1-model_v4 37 411 27 309 0.5875 0.7433
AF-O74863-F1-model_v4 37 405 19 388 0.5856 0.6704
AF-A0A0K0DZ69-F1-model_v4 5 409 8 321 0.5777 0.6805
AF-O25751-F1-model_v4 29 409 44 417 0.4951 0.5648
AF-O74845-F1-model_v4 28 392 139 564 0.4833 0.6298
AF-Q58949-F1-model_v4 8 411 64 542 0.468 0.5809
AF-A0A0D2GEZ1-F1-model_v4 3 411 375 821 0.4632 0.6341
AF-C0P0C6-F1-model_v4 33 411 373 766 0.4234 0.6585
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A515IVB6-F1-model_v4 PL42 6 392 33 431 0.5975 0.6666
AF-A0A7S7M9B1-F1-model_v4 GH33 44 394 8 372 0.564 0.6575
WBP91217.1 GH23 19 411 71 428 0.5137 0.6125
BCW67542.1 CBM0 7 396 57 444 0.4587 0.6881
AF-A0A5P2DCD5-F1-model_v4 GH27 37 411 387 673 0.4205 0.7187
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1V4HJK9 PL22 37 391 39 364 0.6416 0.7702
A0A1C3JKN1 PL25 7 402 63 497 0.5811 0.6749
A0A0J7XZX8 PL42 7 409 15 426 0.5274 0.5721
WBP91217.1 GH23 19 411 71 428 0.5137 0.6125
A0A9W6KQ19 CBM2 1 391 38 594 0.4992 0.6263
QRQ99512.1 CBM57 36 396 47 467 0.4726 0.7232
UOQ69497.1 CBM57 35 411 38 426 0.4618 0.6965
A0A5B8M3L2 GH27 1 403 57 861 0.4566 0.6351
A0A5P2DCD5 GH27 37 411 387 673 0.4205 0.7187
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
8okv-assembly4.cif.gz_D 35 410 1 322 0.6954 0.7989
3dsm-assembly1.cif.gz_A 37 411 1 321 0.6906 0.8011
2bbk-assembly1.cif.gz_J 30 411 3 354 0.6853 0.7608
1ri6-assembly1.cif.gz_A 37 411 2 332 0.6844 0.7802
6nau-assembly3.cif.gz_C 37 411 4 334 0.6837 0.7792
1jof-assembly2.cif.gz_F 37 411 1 365 0.6753 0.736
3scy-assembly1.cif.gz_A 35 411 5 356 0.6714 0.7462
1mae-assembly1.cif.gz_H 30 411 22 372 0.6705 0.7632
2mta-assembly1.cif.gz_H-2 30 411 21 373 0.6698 0.7586
3c75-assembly1.cif.gz_J 30 411 23 373 0.669 0.7636
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8K9N9-F1-model_v4 37 411 1 333 0.6942 0.7858
AF-Q7N6R1-F1-model_v4 37 411 1 328 0.6901 0.7858
AF-O59681-F1-model_v4 39 411 1 340 0.6672 0.7509
AF-Q6CN23-F1-model_v4 39 401 26 339 0.6 0.7226
AF-O74863-F1-model_v4 37 405 19 388 0.5856 0.6704
AF-O34499-F1-model_v4 37 369 51 349 0.5777 0.7356
AF-Q3SZ25-F1-model_v4 4 411 33 421 0.5544 0.6192
AF-Q566T0-F1-model_v4 4 411 40 423 0.5523 0.6261
AF-Q59105-F1-model_v4 35 411 72 520 0.5346 0.713
AF-Q9ZK86-F1-model_v4 31 408 122 417 0.4978 0.6891
Download Full SwissProt Results