PROTEIN: HRGMv2_3983_42_6
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Protein File & Metadata
Source:
HRGMv2_3983_42_6.pdb
Genome ID:
Protein ID:
HRGMv2_3983_42_6
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Protein Sequence
MSRLYSISIV CFVFVIFGGH AFGQQKMKLI PTFENCSYYC DSVFDVTFDK AWNTSATFRL 60 LYKAKKESQW NEAFPPYYDA QCFQLRGSIM NLKENIEYDV RLEKKRKGKW VTAQKGDFTT 120 WNSCPTIKKE WKLSELKEYK AGSGVVLKGL KGRENGWIKI VGDVSIEAPA TYRQALEIDD 180 CKFLILENFV VKGGRIDAVA IRENCENVRV VGADISAWGR VAVDQVHLED SVNYPATKYK 240 RDNACFIDEE GVVIRNDAGI YLGTVGKVPG PQNIVIERCY IHDPNGHSNA WHGVREIGRA 300 KGISYRFWHP QGPQGIYMRS RGGLVIRYND VVGADHYRLH DLLGGFNNGK IDGGMNTDAD 360 VYGNYLAFSQ DDGLEMDGGQ CNIRLYHNRI EQARVGISTA PNIKGPSYLI RNIIFNLGDS 420 NREYSYGIKN GGGTMYSHGL HYFINNTFHI SGNCISSVGY GGDVDRGMFQ GYSRNNIFFN 480 RKESNLKARG CGIYEAHSHL NNHFDYDLFC DENKKDKRGL ARLKSSDCEQ HAIYGDPLFI 540 KPEAGVFTLS AESPAIGYGQ LQTNLSGGTG GSVDMGALAY GSSSLIPHRP IDVQADKYMV 600 VMSHQDSGKV EIKVGQVPAN LSYRLTKNKD MDWLSFETDQ HGDVTSDSSF SILFNTKAVV 660 GKSYRGVFFI RFSNGYSIPV SINVL 685
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UQA58305.1 | PL0 | 22 | 662 | 32 | 627 | 0.6645 |
0.7497 |
| UXI69827.1 | PL0 | 23 | 624 | 27 | 657 | 0.6542 |
0.7344 |
| A0A2N1F7U1 | PL0 | 23 | 647 | 35 | 629 | 0.6389 |
0.7322 |
| UWP85504.1 | PL9 | 106 | 580 | 1 | 444 | 0.5966 |
0.7286 |
| AF-A0A089HM55-F1-model_v4 | PL6_2 | 125 | 677 | 87 | 496 | 0.5822 |
0.8145 |
| AF-A0A2Z5JKG4-F1-model_v4 | PL6_2 | 126 | 677 | 50 | 477 | 0.5811 |
0.7642 |
| ABY31954.1 | PL9_1 | 17 | 582 | 5 | 491 | 0.5527 |
0.6547 |
| AF-A0A3G3GU75-F1-model_v4 | PL0 | 128 | 679 | 53 | 511 | 0.534 |
0.6843 |
| AF-D8KBF7-F1-model_v4 | PL9 | 19 | 648 | 21 | 560 | 0.4667 |
0.6216 |
| AF-F0S8L2-F1-model_v4 | PL6_1 | 126 | 685 | 41 | 768 | 0.4425 |
0.6256 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5B7TZK9 | PL9_2 | 126 | 581 | 17 | 480 | 0.6127 |
0.7622 |
| UWP85504.1 | PL9 | 106 | 580 | 1 | 444 | 0.5966 |
0.7286 |
| A0A172ZC99 | PL9_2 | 123 | 579 | 39 | 526 | 0.59 |
0.7691 |
| BDG73473.1 | PL9 | 126 | 582 | 26 | 452 | 0.5872 |
0.7523 |
| ABY31954.1 | PL9_1 | 17 | 582 | 5 | 491 | 0.5527 |
0.6547 |
| A0A3G3GM92 | PL9_2 | 127 | 583 | 55 | 503 | 0.5444 |
0.7508 |
| D8KBF7 | PL9 | 19 | 648 | 21 | 560 | 0.4667 |
0.6216 |
| F0S8L2 | PL6_1 | 126 | 685 | 41 | 768 | 0.4425 |
0.6256 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.