PROTEIN: HRGMv2_3983_3_226
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Protein File & Metadata
Source:
HRGMv2_3983_3_226.pdb
Genome ID:
Protein ID:
HRGMv2_3983_3_226
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Protein Sequence
MPMFRSFVPR KIQPWIYLFI AVTFQLSGGV YLGALNQMIG GMALMREDIL MCMYANLAGM 60 AIYFPLLFRM KFRFTNKTLL TSAALGVLLC NLIAPHITFL PLLWLICFIE GMCKIQGTFE 120 CMSNIQLWMT PKRDFTVFFP WLHIVVLGSI QLSDLITTYL MYHYHWTYMN LFIAGLMIIV 180 LLIQTVCVKH FRFMRKFPLF GIDWLGAALW AALLAEIAFL FNYGDWYDWW NSPVIRQLSV 240 AIIVTLFFCI WRMMTIRHPF LEPKMWSYRY FWPLLGLVTL VEAFLATEHV LEEVFYEEVM 300 KYEELVSVQL DWFAIIGIVC GCVFSYWWMH VKQYNYVRLV IVGFLGLIGY LIGFYLTLST 360 DIHISQLYLP TLCRGFAYAV LSATFMVCLE EIMTFQHFFQ GLSVFNMLHM VVGGVLGCAV 420 YAQGLAYYVP DNLARYGSAI DHVSFSSSPF NLGHYMEEFI SQMMEVSIKQ IYGWVAYACI 480 FLFLLLLLYD FPVRRSLKSM PSWREVANEV KSTFWRTTHI LSKKDK 526
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q32DH7-F1-model_v4 | 2 | 500 | 6 | 507 | 0.818 |
0.865 |
| AF-P0AEJ0-F1-model_v4 | 1 | 514 | 3 | 512 | 0.8133 |
0.8457 |
| AF-A0A0H3GSP9-F1-model_v4 | 1 | 509 | 26 | 546 | 0.8121 |
0.8701 |
| AF-P52600-F1-model_v4 | 1 | 500 | 7 | 507 | 0.8101 |
0.8579 |
| AF-Q9I482-F1-model_v4 | 1 | 515 | 5 | 480 | 0.8086 |
0.8677 |
| AF-Q9HZ88-F1-model_v4 | 14 | 500 | 1 | 489 | 0.8018 |
0.8576 |
| AF-A0A0H3GNL5-F1-model_v4 | 1 | 503 | 9 | 520 | 0.7993 |
0.8461 |
| AF-Q9I4A2-F1-model_v4 | 10 | 498 | 7 | 503 | 0.7992 |
0.8553 |
| AF-Q8ZMK8-F1-model_v4 | 3 | 513 | 4 | 512 | 0.793 |
0.8262 |
| AF-A0A0H3GPJ5-F1-model_v4 | 1 | 498 | 3 | 470 | 0.793 |
0.8604 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 5 | 501 | 12 | 535 | 0.7269 |
0.8055 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 2 | 498 | 19 | 465 | 0.6466 |
0.7467 |
| ARF89445.1 | GT1 | 1 | 502 | 361 | 957 | 0.6415 |
0.8694 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 1 | 517 | 33 | 744 | 0.6046 |
0.7987 |
| A0A918L8E6 | GT2 | 9 | 526 | 2 | 634 | 0.5724 |
0.6632 |
| AF-A0A1D7Y1M4-F1-model_v4 | GH17 | 10 | 500 | 9 | 463 | 0.5466 |
0.7514 |
| AF-A0A1J0LIF2-F1-model_v4 | GH17 | 10 | 500 | 14 | 464 | 0.5437 |
0.7529 |
| A0A3C1RID2 | GH17 | 10 | 525 | 13 | 637 | 0.5422 |
0.6682 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 498 | 273 | 753 | 0.5419 |
0.71 |
| AF-A0A7G8WFN5-F1-model_v4 | GH17 | 11 | 521 | 1 | 724 | 0.5407 |
0.6683 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 5 | 501 | 12 | 535 | 0.7269 |
0.8055 |
| ARF89445.1 | GT1 | 1 | 502 | 361 | 957 | 0.6415 |
0.8694 |
| A0A387HHJ8 | GT1 | 1 | 517 | 33 | 744 | 0.6046 |
0.7987 |
| A0A918L8E6 | GT2 | 9 | 526 | 2 | 634 | 0.5724 |
0.6632 |
| A0A3C1RID2 | GH17 | 10 | 525 | 13 | 637 | 0.5422 |
0.6682 |
| A0A7H8RF34 | CBM24 | 1 | 498 | 273 | 753 | 0.5419 |
0.71 |
| S5VEU6 | CE14 | 9 | 519 | 21 | 780 | 0.5322 |
0.6679 |
| BEI93633.1 | AA6 | 2 | 518 | 39 | 526 | 0.5279 |
0.6751 |
| A0A9Q9RZ67 | GH78 | 1 | 499 | 751 | 1444 | 0.5258 |
0.8169 |
| A0A7H8QT70 | GH27 | 1 | 526 | 113 | 995 | 0.5244 |
0.6973 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 1 | 498 | 1 | 483 | 0.7647 |
0.8168 |
| 8pnl-assembly2.cif.gz_C | 1 | 497 | 1 | 486 | 0.7596 |
0.8087 |
| 7y58-assembly1.cif.gz_A | 1 | 499 | 1 | 505 | 0.756 |
0.8022 |
| 7d5p-assembly2.cif.gz_B | 13 | 497 | 1 | 413 | 0.7277 |
0.8301 |
| 7d5p-assembly1.cif.gz_A | 11 | 497 | 1 | 408 | 0.7268 |
0.8332 |
| 7d5q-assembly2.cif.gz_B | 13 | 494 | 1 | 411 | 0.7238 |
0.8274 |
| 7d5q-assembly1.cif.gz_A | 13 | 494 | 1 | 403 | 0.7204 |
0.83 |
| 6kkl-assembly1.cif.gz_A | 8 | 498 | 1 | 372 | 0.7147 |
0.8501 |
| 8b1j-assembly1.cif.gz_A | 9 | 498 | 1 | 451 | 0.707 |
0.7789 |
| 7yr5-assembly1.cif.gz_A | 1 | 500 | 1 | 384 | 0.7052 |
0.8304 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RQ29-F1-model_v4 | 1 | 500 | 1 | 501 | 0.8198 |
0.8609 |
| AF-P0AEJ1-F1-model_v4 | 1 | 511 | 3 | 512 | 0.8152 |
0.8476 |
| AF-P0AEJ0-F1-model_v4 | 1 | 514 | 3 | 512 | 0.8133 |
0.8457 |
| AF-P0DPR7-F1-model_v4 | 1 | 500 | 9 | 512 | 0.813 |
0.8582 |
| AF-P52600-F1-model_v4 | 1 | 500 | 7 | 507 | 0.8101 |
0.8579 |
| AF-P44927-F1-model_v4 | 1 | 503 | 7 | 510 | 0.8093 |
0.8514 |
| AF-P32369-F1-model_v4 | 10 | 506 | 9 | 477 | 0.7949 |
0.8643 |
| AF-P54585-F1-model_v4 | 1 | 523 | 7 | 530 | 0.7834 |
0.8113 |
| AF-P23054-F1-model_v4 | 2 | 498 | 4 | 458 | 0.7827 |
0.8582 |
| AF-P94574-F1-model_v4 | 1 | 498 | 1 | 452 | 0.7812 |
0.8568 |