PROTEIN: HRGMv2_3983_3_225
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Protein File & Metadata
Source:
HRGMv2_3983_3_225.pdb
Genome ID:
Protein ID:
HRGMv2_3983_3_225
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Protein Sequence
MKSERLLSLD VLRGITIVGM ILVNNPGTWE SIYAPLRHAE WNGLTPTDLV FPFFMFIMGV 60 SMSFALSKFD HHFSRSFVTK LIRRTVILFL LGVFLSWFSL VCFGVEHPLE HIRILGVLQR 120 LALAYCFGSL LIMSVRRPVN LAWISGILLI GYYILLMLGN GFDLSEQNVI AVTDRWIFGE 180 NHMYREWLPD GSRIFFDPEG LLSTLPCIAQ VIIGYFCGNI LREKTEIQHR LLQISILGII 240 LLFAGLLFSY GCPLNKKVWS PTFVLVTCGF ASLFLVFLTW LIDIKKQQKW GYAFHVFGTN 300 PLFIYVVAGV LATVLAVIPV GDTSLQGKIY QSIVAVFRDA YLASLIYGLL FIGFNYLIVL 360 VLYKKRIFIK I 371
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q55C73-F1-model_v4 | 1 | 371 | 41 | 426 | 0.8604 |
0.9285 |
| AF-A0A368UJV1-F1-model_v4 | 1 | 371 | 15 | 455 | 0.8265 |
0.9207 |
| AF-K7KGM5-F1-model_v4 | 1 | 371 | 25 | 465 | 0.8207 |
0.9224 |
| AF-I1NBX1-F1-model_v4 | 1 | 371 | 23 | 464 | 0.8203 |
0.9213 |
| AF-Q94CC1-F1-model_v4 | 1 | 371 | 30 | 472 | 0.8194 |
0.9266 |
| AF-K7LGV3-F1-model_v4 | 1 | 371 | 49 | 489 | 0.8095 |
0.9288 |
| AF-Q5WMX9-F1-model_v4 | 1 | 371 | 50 | 491 | 0.8086 |
0.9293 |
| AF-B4FES9-F1-model_v4 | 1 | 371 | 37 | 484 | 0.8085 |
0.9242 |
| AF-Q5JK28-F1-model_v4 | 1 | 371 | 48 | 488 | 0.8068 |
0.9251 |
| AF-A0A1D6FME0-F1-model_v4 | 1 | 371 | 50 | 513 | 0.7945 |
0.9298 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 371 | 856 | 1227 | 0.6074 |
0.9366 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 371 | 856 | 1227 | 0.6074 |
0.9366 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6CK18-F1-model_v4 | 1 | 371 | 110 | 446 | 0.7091 |
0.8602 |
| AF-Q9UTL4-F1-model_v4 | 1 | 371 | 113 | 459 | 0.6992 |
0.8357 |
| AF-B3H6K1-F1-model_v4 | 4 | 371 | 104 | 434 | 0.6989 |
0.8525 |
| AF-Q3UDW8-F1-model_v4 | 1 | 371 | 255 | 656 | 0.6893 |
0.8857 |
| AF-Q754I2-F1-model_v4 | 1 | 371 | 107 | 480 | 0.6882 |
0.7873 |
| AF-Q68CP4-F1-model_v4 | 1 | 371 | 262 | 663 | 0.688 |
0.8873 |
| AF-Q2UQH4-F1-model_v4 | 1 | 371 | 126 | 500 | 0.6858 |
0.7975 |
| AF-Q873N2-F1-model_v4 | 1 | 371 | 112 | 485 | 0.6836 |
0.7861 |
| AF-P47026-F1-model_v4 | 1 | 371 | 117 | 490 | 0.6826 |
0.7879 |
| AF-Q873N1-F1-model_v4 | 1 | 371 | 126 | 500 | 0.6814 |
0.7933 |