PROTEIN: HRGMv2_3983_1_111
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Protein File & Metadata
Source:
HRGMv2_3983_1_111.pdb
Genome ID:
Protein ID:
HRGMv2_3983_1_111
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Protein Sequence
MKQLLNVFLF VTMLLGLSAC EKEDKDMFIV EGERNFSIAK EGDMISVILR TTQDYRVTPE 60 NNWCIVLAKQ PIGFKIQVDE NTTVRERENK ITIESNIGAP VVLTIKQEAG ELFFRMDDSE 120 KTKQFAQEGG TQTVALQTNL ESYEVIAPAW CTISEKTNEG FKITAGANSD FRREETLLVR 180 AQGMEDIEIL VKQNGEPLLK NSYFLDGNFE PWVIERSAEN VFVAGTWIPS SITDPEKSRY 240 RAIKVDTGGA SQGSIFQTVN GIPDGVYTLT FVAQAGGSST DGSNLWLVVI NSEGYETVES 300 IFAEARGGWR TITRPLTITG GKVTIGLRAT RGSDKGIWFH ALGFVLE 347
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A402D6J6-F1-model_v4 | CBM61 | 37 | 347 | 109 | 498 | 0.4077 |
0.5379 |
| AF-A0A402D575-F1-model_v4 | CBM61 , GH26 | 30 | 347 | 45 | 636 | 0.3936 |
0.554 |
| AF-A0A172THA2-F1-model_v4 | CBM61 , GH0 | 29 | 347 | 149 | 607 | 0.3717 |
0.5132 |
| UKS28036.1 | CBM61 , GH136 | 39 | 347 | 407 | 741 | 0.3549 |
0.5397 |
| AF-F8A1Y8-F1-model_v4 | CBM61 , GH53 | 29 | 347 | 14 | 635 | 0.3203 |
0.5136 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A402D6J6 | CBM61 | 37 | 347 | 109 | 498 | 0.4077 |
0.5379 |
| A0A402D575 | CBM61 , GH26 | 30 | 347 | 45 | 636 | 0.3936 |
0.554 |
| A0A172THA2 | CBM61 , GH0 | 29 | 347 | 149 | 607 | 0.3717 |
0.5132 |
| UKS28036.1 | CBM61 , GH136 | 39 | 347 | 407 | 741 | 0.3549 |
0.5397 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5w6h-assembly1.cif.gz_C | 9 | 347 | 51 | 697 | 0.3545 |
0.4875 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.