PROTEIN: HRGMv2_3978_6_144
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Protein File & Metadata
Source:
HRGMv2_3978_6_144.pdb
Genome ID:
Protein ID:
HRGMv2_3978_6_144
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Protein Sequence
MGKRILIFVT VCMGLCTTAE AQVTERERPR EWDSLVEGGR FADRFMAMPD GTLSADTWGA 60 EQTRPRFTDN GIEDRERSYW GGNILRGDDG LYHLFVCGWK ENSPRGHHQW PYSIVYHTVS 120 ENLQGLYAIR DTIGPGHNPE AFRTADGKYV VYVIDHYYLA DNINGPWSRH EFEFDARDRK 180 IIEGLSNLTF TRRQDGSYLM VCRGGGVWIS RTGLTPYNQI SDRRIYPPVE GEFEDPVVWR 240 DSVQYNAIVN DWLGRVAFYM RSKDGVNWVT DSGEAYMPGI ARHKDGRKED WFKYERIKIF 300 QDEYGRAVQA NFAVIDTLKD EDKPNDRHSS KNICIPLNPG VRMALVDKNP ITPATKEIKL 360 LIKAEPGFNP HTDVDVASLR FGASSEVNFG RGCREKGTKK SGKDLIVIFD AAGNGITPDE 420 FAPKLIGRKK GGLLFGYCRL PWLDYTPAVL SARKTEIVTK DGKQTISVVV ENFGLRPSRT 480 VEIRATADVN GVPAVIGRST VPAMKPY 507
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A7LRR2 | GH97 | 5 | 507 | 5 | 508 | 0.6855 |
0.9685 |
| AF-F0S5S9-F1-model_v4 | GH117 | 34 | 443 | 19 | 326 | 0.6353 |
0.8235 |
| AF-A0A7D4TW12-F1-model_v4 | GH117 | 36 | 440 | 20 | 320 | 0.6322 |
0.8288 |
| A0A8J8MPU7 | GH117 | 39 | 404 | 1 | 341 | 0.6306 |
0.7607 |
| A0A3D9I6Y6 | GH117 | 36 | 432 | 1 | 349 | 0.6266 |
0.7495 |
| WJH33547.1 | GH117 | 38 | 340 | 1 | 321 | 0.6259 |
0.817 |
| QYY35068.1 | GH117 | 36 | 339 | 7 | 340 | 0.6249 |
0.8395 |
| AF-A0A172TN86-F1-model_v4 | GH117 | 36 | 403 | 1 | 349 | 0.623 |
0.7453 |
| AF-A0A3G9JBE5-F1-model_v4 | GH117 | 36 | 340 | 1 | 342 | 0.6229 |
0.837 |
| AF-A0A5C0VP32-F1-model_v4 | GH117 | 37 | 432 | 26 | 333 | 0.6216 |
0.8156 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A7LRR2 | GH97 | 5 | 507 | 5 | 508 | 0.6855 |
0.9685 |
| A0A8J8MPU7 | GH117 | 39 | 404 | 1 | 341 | 0.6306 |
0.7607 |
| A0A3D9I6Y6 | GH117 | 36 | 432 | 1 | 349 | 0.6266 |
0.7495 |
| WJH33547.1 | GH117 | 38 | 340 | 1 | 321 | 0.6259 |
0.817 |
| QYY35068.1 | GH117 | 36 | 339 | 7 | 340 | 0.6249 |
0.8395 |
| A0A5C0VP32 | GH117 | 37 | 432 | 26 | 333 | 0.6216 |
0.8156 |
| A9KLI8 | GH117 | 37 | 341 | 1 | 350 | 0.619 |
0.8417 |
| QYY35205.1 | GH117 | 38 | 434 | 8 | 354 | 0.6162 |
0.7461 |
| D5EQ86 | GH117 | 33 | 436 | 1 | 346 | 0.6105 |
0.7336 |
| A0A1W6LQJ2 | GH117 | 35 | 435 | 21 | 361 | 0.6084 |
0.7573 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5msx-assembly1.cif.gz_A | 55 | 388 | 1 | 283 | 0.4827 |
0.7873 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5B9Z8-F1-model_v4 | 37 | 338 | 30 | 327 | 0.5681 |
0.7615 |