PROTEIN: HRGMv2_3977_28_8
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Protein File & Metadata
Source:
HRGMv2_3977_28_8.pdb
Genome ID:
Protein ID:
HRGMv2_3977_28_8
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Protein Sequence
MNVLKKTMVL AAFAFLPMTM CSCGGDEGPS VPGVPAPPPV ERPSVAELMN ILWNETSYLN 60 LDSRRKSAMA EMQVYADMCP NTAFKDYYAA VDPAAIAAME DNSMIGFHHD ALKRVLDQVK 120 TEVVPAGTVV LWQVYNMGYV VKTPTHTFAI DLKHKFAEEF APFIEFLCIT HAHDDHYTRA 180 LVDAMGVAGK PVYSNFIDNG YMIGVAATIS PCDGISMEVK IADHNSELKN FVVNYQIDCG 240 ADTGHAVILH TGDSHNHTQL LKTRDIDIFI PHLAVGLNMA KAVERLDPRI VLMSHILELD 300 HPVEKWRWSY QYGINEVEKL NRRGVYLPVW GEKITYRK 338
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6IQ20-F1-model_v4 | 75 | 338 | 91 | 388 | 0.5582 |
0.7663 |
| AF-Q8BH82-F1-model_v4 | 75 | 338 | 91 | 388 | 0.5564 |
0.7663 |
| AF-Q769K2-F1-model_v4 | 75 | 338 | 91 | 388 | 0.5559 |
0.7656 |
| AF-Q5TZE8-F1-model_v4 | 3 | 338 | 17 | 409 | 0.5473 |
0.619 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2wyl-assembly1.cif.gz_B | 15 | 338 | 5 | 290 | 0.6335 |
0.7178 |
| 2wym-assembly1.cif.gz_E | 14 | 338 | 4 | 287 | 0.6316 |
0.7178 |
| 2wyl-assembly1.cif.gz_C | 15 | 338 | 5 | 287 | 0.6313 |
0.7187 |
| 2wym-assembly1.cif.gz_B | 15 | 338 | 5 | 288 | 0.6308 |
0.717 |
| 2wym-assembly1.cif.gz_C | 15 | 338 | 5 | 286 | 0.6306 |
0.7187 |
| 2wym-assembly1.cif.gz_F | 15 | 338 | 5 | 288 | 0.6302 |
0.7175 |
| 2wyl-assembly1.cif.gz_F | 15 | 338 | 5 | 289 | 0.6297 |
0.7161 |
| 2wyl-assembly1.cif.gz_A | 15 | 338 | 5 | 291 | 0.6288 |
0.7124 |
| 6hrg-assembly1.cif.gz_A | 127 | 338 | 1 | 232 | 0.627 |
0.8236 |
| 2wym-assembly1.cif.gz_A | 15 | 338 | 5 | 288 | 0.6267 |
0.7158 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P81414-F1-model_v4 | 129 | 336 | 1 | 210 | 0.6446 |
0.8149 |
| AF-O57860-F1-model_v4 | 129 | 336 | 1 | 211 | 0.6408 |
0.8134 |
| AF-Q9V2F5-F1-model_v4 | 129 | 336 | 1 | 210 | 0.6386 |
0.8085 |
| AF-Q317E4-F1-model_v4 | 127 | 338 | 1 | 232 | 0.6351 |
0.8469 |
| AF-Q6IQ20-F1-model_v4 | 75 | 338 | 91 | 388 | 0.5582 |
0.7663 |
| AF-Q5RCU3-F1-model_v4 | 75 | 338 | 91 | 388 | 0.5577 |
0.7657 |
| AF-Q58CN9-F1-model_v4 | 75 | 338 | 90 | 386 | 0.5566 |
0.7631 |
| AF-Q8BH82-F1-model_v4 | 75 | 338 | 91 | 388 | 0.5564 |
0.7663 |
| AF-Q769K2-F1-model_v4 | 75 | 338 | 91 | 388 | 0.5559 |
0.7656 |
| AF-P44408-F1-model_v4 | 46 | 338 | 19 | 765 | 0.4108 |
0.6548 |