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PROTEIN: HRGMv2_3977_255_2

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_3977_255_2.pdb
Genome ID:
HRGMv2_3977
Protein ID:
HRGMv2_3977_255_2

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Detailed structural information will appear here after analysis...

Protein Sequence 
MDKNVRHRKA   GVTPWAWVST   LYFAEAMPYV   AVMTLSVLMY   KVMGISNGEI   AFYTSWLYLP 60
WVIKPLWSPF   VDILRTKRWW   IVTTEALIAV   GLACVAFTLP   GAWFFQLSLA   FFWLTAFVSA 120
THDIAADGFY   MLALTEHQQA   FYVGIRSTFY   RIATITAQGG   LVALSWVLGE   HGASVALSWA 180
VVMGLISACF   FIFSIYHYIV   LPRPFADRPV   GNVSGANAGK   EFLRTFATFF   QKPQALVGIL 240
FMLLYRLPEA   QLMKLINPFL   VDGRDVGGLG   LTTGEVGLVY   GTVGVIGLTV   GGIVGGIVTA 300
RGGLKKWLWP   MAWSISLTCV   VFCYLAWAQP   TSLITICICV   GVEQLGYGFG   FSAYMLYLIY 360
YSEGELRTAH   YAICTGFMAL   GMMLPGMVAG   WIQEQLGYEG   FFWWVMICCV   VTIAVTALIK 420
VPESFGKKHV 430
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A132Z6J0-F1-model_v4 7 424 6 412 0.847 0.8902
AF-Q5F6G0-F1-model_v4 11 427 13 424 0.8467 0.8923
AF-A0A0H3GRF2-F1-model_v4 3 429 4 400 0.838 0.8957
AF-Q58955-F1-model_v4 7 421 1 386 0.8287 0.8909
AF-Q9HW46-F1-model_v4 13 430 1 388 0.8276 0.8859
AF-Q6I5Y4-F1-model_v4 1 425 3 433 0.8251 0.8592
AF-K0F2J1-F1-model_v4 1 427 6 412 0.8226 0.868
AF-Q329F4-F1-model_v4 1 423 9 394 0.8217 0.8914
AF-K0EPU7-F1-model_v4 14 423 1 384 0.8216 0.8986
AF-Q32E16-F1-model_v4 5 430 1 382 0.8196 0.8853
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A2S189-F1-model_v4 GH3 1 429 3 413 0.8105 0.8547
WBC00074.1 CBM42 , GH2 1 429 49 493 0.7612 0.8463
AF-A0A160T6G0-F1-model_v4 CBM9 1 427 7 533 0.7257 0.8344
A0A9W8R2E6 GH88 1 427 31 516 0.7081 0.7929
AF-Q6NMN6-F1-model_v4 GT5 9 426 20 466 0.6846 0.7703
AF-L7WC43-F1-model_v4 GH17 1 429 1 459 0.6568 0.8533
AF-A0A1G5E1B9-F1-model_v4 GH17 1 429 2 460 0.6549 0.8517
AF-A0A7L5FXW1-F1-model_v4 GH17 1 429 1 460 0.6548 0.8516
AF-A0A1Y0MVF8-F1-model_v4 GH17 4 429 5 462 0.6544 0.8576
AF-A0A2K8X8V5-F1-model_v4 GH17 1 429 1 460 0.6527 0.8489
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A2S189 GH3 1 429 3 413 0.8105 0.8547
WBC00074.1 CBM42 , GH2 1 429 49 493 0.7612 0.8463
A0A160T6G0 CBM9 1 427 7 533 0.7257 0.8344
A0A9W8R2E6 GH88 1 427 31 516 0.7081 0.7929
A0A8S2AI60 GH17 1 425 48 681 0.6595 0.8281
K4IH60 GH17 2 429 6 536 0.6302 0.8483
A0A3S4KEY5 GH36 1 425 258 708 0.6288 0.8019
VEC51885.1 GH2 1 427 227 730 0.6241 0.8058
A0A4P7NHB9 GH131 1 425 65 616 0.6113 0.8385
BEI93633.1 AA6 2 430 36 757 0.607 0.784
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6kkk-assembly3.cif.gz_C 10 428 1 381 0.8376 0.9031
6kkl-assembly1.cif.gz_A 12 425 1 372 0.83 0.9043
6kkj-assembly1.cif.gz_B 13 423 1 357 0.8051 0.8946
8jtc-assembly1.cif.gz_A 12 424 1 391 0.8028 0.8583
7dla-assembly1.cif.gz_A 12 421 1 402 0.8007 0.846
8g92-assembly1.cif.gz_A 11 425 1 406 0.8006 0.8486
6vs2-assembly1.cif.gz_A 12 421 1 387 0.7998 0.8614
7yub-assembly1.cif.gz_R 6 425 1 417 0.7992 0.8405
8ex6-assembly1.cif.gz_A 12 426 1 407 0.7982 0.8456
7yr5-assembly1.cif.gz_A 5 423 1 378 0.7964 0.8717
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q92HQ3-F1-model_v4 5 424 2 417 0.8718 0.8985
AF-Q1RIL0-F1-model_v4 11 424 1 409 0.8717 0.9055
AF-Q4UL88-F1-model_v4 2 424 1 441 0.8512 0.8864
AF-Q9ZD69-F1-model_v4 2 424 1 443 0.845 0.8824
AF-A9MYZ7-F1-model_v4 3 430 1 395 0.8438 0.8965
AF-Q6CZ44-F1-model_v4 5 429 1 395 0.8342 0.8859
AF-Q58955-F1-model_v4 7 421 1 386 0.8287 0.8909
AF-P39843-F1-model_v4 3 423 1 393 0.8272 0.8891
AF-B5QU11-F1-model_v4 1 429 8 397 0.8268 0.8909
AF-Q8X625-F1-model_v4 13 430 2 389 0.8263 0.8864
Download Full SwissProt Results