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PROTEIN: HRGMv2_3901_27_12

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Protein File & Metadata
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Source:
HRGMv2_3901_27_12.pdb
Genome ID:
HRGMv2_3901
Protein ID:
HRGMv2_3901_27_12

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKNKKTILAV   VLIFAVSTGT   DCIFAQNRKD   NAPLVIQEQG   SFATGGTVTT   DKEGHQFHGD 60
HAYVFYQKPI   HPNRYPIVFL   HGIHQASKTW   ETTPDGRDGF   QNIFLRRGFS   TYNMTLPRRG 120
NAGRGQVGME   VKPVYDEQSW   YTKWRIGVYP   DYFDGVQFAR   DEESLNQFMR   QMVPETGPTD 180
FEMNAGVVAG   LFDKLGGGIL   MSHSQGVMHT   WKILPKTGNV   KAVVAIEGGG   YFSFPADEPR 240
PDIDADEGLE   YIMVSPEIFK   SFTRVPMLLI   YGDNIPTKHN   DIYELDVWRI   RLSLARQWAA 300
AVNRRGGDVT   VVHLPEIGIK   GNTHFPMSDL   NNAEIADVIS   KWLHEKGMDK 350
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-U7PS40-F1-model_v4 8 350 10 350 0.8616 0.8982
AF-A0A175VXU1-F1-model_v4 15 350 20 351 0.8352 0.8947
AF-A0A175W4M0-F1-model_v4 26 350 40 361 0.8103 0.9066
AF-C1GUG1-F1-model_v4 17 345 12 367 0.7423 0.8214
AF-A0A1C1CLS4-F1-model_v4 31 350 1 363 0.7225 0.8176
AF-A0A0D2DIS4-F1-model_v4 33 350 5 364 0.7168 0.8174
AF-A0A0D2DWL9-F1-model_v4 15 350 6 387 0.7104 0.7927
AF-A0A0D2EX82-F1-model_v4 18 350 1 402 0.7032 0.8106
AF-I1NJC6-F1-model_v4 31 346 1 225 0.6605 0.8181
AF-Q8GYI7-F1-model_v4 31 346 1 228 0.6551 0.8074
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A2S0KC63-F1-model_v4 CE1 20 349 26 332 0.564 0.6396
A0A9Q9G1W4 CE0 32 350 47 322 0.5518 0.6789
AF-A0A2I6QJB0-F1-model_v4 CE0 33 350 67 347 0.5495 0.6882
AF-A0A0D3VFH9-F1-model_v4 CE7 33 350 50 320 0.5492 0.6854
WDH75442.1 CE7 33 350 50 316 0.5478 0.6877
AF-A0A0B4S5C0-F1-model_v4 CE7 33 350 50 318 0.5471 0.6845
C1A2T1 CE1 34 350 44 328 0.5462 0.6584
AF-Q9K5F2-F1-model_v4 CE7 33 350 50 318 0.5456 0.6846
AF-A0A2X4SVC9-F1-model_v4 CE1 33 350 38 337 0.5455 0.6354
AF-A0A6B8K8C0-F1-model_v4 CE7 32 350 53 324 0.5455 0.6814
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
H6MUQ2 CE1 8 348 6 322 0.5697 0.6205
A0A1B1Z8N8 CE7 33 350 45 314 0.5587 0.6945
WDH75442.1 CE7 33 350 50 316 0.5478 0.6877
C1A2T1 CE1 34 350 44 328 0.5462 0.6584
Q9K5F2 CE7 33 350 50 318 0.5456 0.6846
D5UQK0 CE1 24 348 35 327 0.5452 0.6414
A0A1H9DXF9 CE7 33 350 50 299 0.5368 0.6993
F7YWS3 CE7 33 350 50 321 0.5361 0.667
A0A4P6LZU5 CE7 33 350 50 320 0.5345 0.6661
WDL97614.1 CE7 33 348 49 320 0.534 0.6698
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4q34-assembly1.cif.gz_A-2 31 349 1 321 0.9256 0.9782
8j7j-assembly1.cif.gz_B 28 350 1 349 0.8536 0.9337
7yd2-assembly1.cif.gz_B 30 350 1 348 0.8534 0.9377
8ive-assembly1.cif.gz_B 30 350 1 348 0.8529 0.9372
7y0l-assembly1.cif.gz_A 30 350 1 348 0.8527 0.937
8goy-assembly1.cif.gz_B 30 350 1 348 0.8523 0.9366
8gol-assembly2.cif.gz_D-2 30 350 1 348 0.851 0.9356
2wkw-assembly1.cif.gz_B 26 348 1 315 0.8183 0.8709
4zi5-assembly1.cif.gz_B 33 350 1 239 0.6272 0.7608
7jiz-assembly1.cif.gz_B 35 350 1 239 0.62 0.7527
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-D4AV38-F1-model_v4 22 347 17 368 0.7195 0.8283
AF-Q5I0C4-F1-model_v4 24 347 29 242 0.6303 0.8492
AF-P73163-F1-model_v4 29 350 1 246 0.6297 0.7559
AF-F8QQ74-F1-model_v4 29 350 1 244 0.6265 0.7609
AF-A0QNZ7-F1-model_v4 32 348 1 280 0.6134 0.6943
AF-O07427-F1-model_v4 34 348 1 279 0.6116 0.6931
AF-Q9L6M9-F1-model_v4 23 350 18 269 0.6023 0.7405
AF-G2JHL6-F1-model_v4 29 350 3 304 0.5789 0.637
AF-Q86WA6-F1-model_v4 32 344 32 291 0.57 0.704
AF-C3K630-F1-model_v4 32 350 1 303 0.5651 0.6248
Download Full SwissProt Results