PROTEIN: HRGMv2_3900_9_5
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3900_9_5.pdb
Genome ID:
Protein ID:
HRGMv2_3900_9_5
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MIKIEYNSFK MLSMMLIICA LSVSCKSGHG MEFVLDMVHN NPGETPYVTK YNNPEYLHSK 60 GFTGAVTHWH VNCGIDYSNT EPGVVSGDEA RWIKRHAEKI DSCLAEFVRH GVKVYPFTDF 120 VVFPKSIWDK YGSQIGDVSR HKPDINSPVT KRLLMEQIDE IFRRFPNLDG LTLRFGETYL 180 HDTPWHLGNS PIGENDIEDH VTLIKLLRKE ICEKRGKVLF YRTWDFGYKF HNSPEYYLSV 240 TDRIEPHEKL LFSIKYQQDD YHRMTPFNPT LGIGKHRQIV ESQSRMEAYG KGAHPYYVAS 300 GVINGWPETE NEIEFGTHRF TGRRTPEGSP RGVSDVLESG LISGVMTWSN GGGWQGPYIK 360 HEIWTDINTL VMSKWAHDTT KSECELFNQT CKELGFSDSD TKIMREIAEL SVEGVRKGQL 420 NSYVSNDVWW SRDEFFNVAQ CRKSITEAYE QNLMDSILEE KNEAVEIWNR IEKLSKSIAC 480 ENDSEMREAI EVSCTYGRIK YELINKMWIL MSEKYRADTN GGFDEDRVKN ALADYDRLWS 540 EWRELKRSSD LCATLYTDMA FRNSHKNSIG ELVEWFKSEI DG 582
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-F1R042-F1-model_v4 | 29 | 553 | 95 | 468 | 0.5126 |
0.7077 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5S9IR15-F1-model_v4 | GH0 | 25 | 582 | 43 | 620 | 0.6754 |
0.8352 |
| QRN95889.1 | GH0 | 25 | 582 | 51 | 631 | 0.6638 |
0.8359 |
| AF-A0A5Q0GW34-F1-model_v4 | GH0 | 26 | 582 | 161 | 733 | 0.6377 |
0.8346 |
| AF-A0A7L6BEL5-F1-model_v4 | GH0 | 17 | 582 | 66 | 730 | 0.6341 |
0.8275 |
| AF-A0A7R7DPC5-F1-model_v4 | GH0 | 26 | 582 | 139 | 716 | 0.6312 |
0.8318 |
| AF-A0A1C4YQM2-F1-model_v4 | GH0 | 26 | 582 | 168 | 749 | 0.6305 |
0.8378 |
| AF-A0A6F8XTC7-F1-model_v4 | GH0 | 22 | 582 | 120 | 753 | 0.63 |
0.834 |
| AF-A0A1A8ZGE8-F1-model_v4 | GH0 | 26 | 582 | 165 | 746 | 0.6295 |
0.8383 |
| AF-A0A1C4ZQQ4-F1-model_v4 | GH0 | 16 | 582 | 122 | 791 | 0.627 |
0.831 |
| AF-A0A7S8RH59-F1-model_v4 | GH0 | 26 | 582 | 152 | 730 | 0.627 |
0.8293 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A290Q4E1 | GH138 | 22 | 582 | 56 | 698 | 0.6224 |
0.7177 |
| A0A6H0KUB2 | GH67 | 24 | 573 | 75 | 721 | 0.6012 |
0.7094 |
| I3I835 | GH67 | 24 | 571 | 126 | 744 | 0.5987 |
0.7183 |
| A0A5B9ED23 | GH138 | 22 | 582 | 85 | 714 | 0.589 |
0.742 |
| A0A7X9SA48 | GH138 | 22 | 582 | 84 | 722 | 0.5855 |
0.7434 |
| D3EEH2 | GH138 | 23 | 582 | 80 | 717 | 0.5835 |
0.743 |
| A0A7M1SS77 | GH138 | 24 | 582 | 82 | 719 | 0.5833 |
0.7437 |
| A0A6S6QPC4 | GH138 | 22 | 582 | 89 | 726 | 0.5823 |
0.7405 |
| A0A7L5A6R2 | GH138 | 22 | 582 | 73 | 743 | 0.5822 |
0.7421 |
| A0A5P2G1P4 | GH138 | 24 | 582 | 107 | 742 | 0.5812 |
0.7454 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6hzg-assembly1.cif.gz_A | 22 | 582 | 55 | 691 | 0.6495 |
0.7433 |
| 1h41-assembly1.cif.gz_A | 24 | 571 | 91 | 700 | 0.6103 |
0.7138 |
| 1h41-assembly1.cif.gz_B | 24 | 571 | 91 | 701 | 0.6098 |
0.7138 |
| 1gql-assembly1.cif.gz_B | 24 | 563 | 90 | 700 | 0.6096 |
0.7222 |
| 1mqr-assembly1.cif.gz_A-2 | 24 | 576 | 84 | 674 | 0.5998 |
0.6847 |
| 6hzf-assembly2.cif.gz_B | 23 | 582 | 43 | 677 | 0.5986 |
0.7423 |
| 1k9e-assembly1.cif.gz_A | 24 | 576 | 83 | 671 | 0.5982 |
0.6815 |
| 6hze-assembly2.cif.gz_B | 22 | 582 | 47 | 683 | 0.5972 |
0.742 |
| 6hze-assembly1.cif.gz_A | 22 | 582 | 49 | 685 | 0.5966 |
0.7422 |
| 6hzf-assembly1.cif.gz_A | 22 | 582 | 50 | 686 | 0.5959 |
0.7417 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0CJP9-F1-model_v4 | 24 | 576 | 112 | 831 | 0.5858 |
0.7317 |