PROTEIN: HRGMv2_3900_93_4
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Protein File & Metadata
Source:
HRGMv2_3900_93_4.pdb
Genome ID:
Protein ID:
HRGMv2_3900_93_4
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Protein Sequence
MLSSVVAFAQ KPDKNEVKQL QNFLSQPAER GGTNAQALKI TDLSAPSTWE GVTVENGKVT 60 AIQWKDKHLA GTLNLSGFKA LTKVDVSRNA LTGLNVSNNP ALIEVNASRN KLAEMTIDND 120 GALAKLSIYR NRLTDLNITG TPFLTDLNCS NNLFVELNLA NAVNLKTLNC QGCHIEQLDI 180 QGCAALKNLY CGYNKLSTIN LFGVENLTNF NIDDNEISEL IISGLPSLST FICSDNRMKS 240 LALRNCNALI DVVCSYNDLT SFTLDNCPNL QYIDCSYNDL TSLTASNLTF LQRLICNNNQ 300 LTMLDVSFDQ ALTYINCRYN YITDFRTIGC TSLNMVACQW NY 342
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P40197-F1-model_v4 | 1 | 342 | 6 | 422 | 0.6649 |
0.833 |
| AF-G3V9H9-F1-model_v4 | 1 | 342 | 4 | 374 | 0.6578 |
0.8275 |
| AF-O08770-F1-model_v4 | 1 | 342 | 5 | 452 | 0.6473 |
0.8146 |
| AF-Q9VT44-F1-model_v4 | 35 | 342 | 39 | 403 | 0.6428 |
0.8829 |
| AF-A0A044VDX9-F1-model_v4 | 5 | 342 | 12 | 355 | 0.6134 |
0.7854 |
| AF-G3XA59-F1-model_v4 | 34 | 342 | 109 | 505 | 0.5855 |
0.854 |
| AF-Q9VS84-F1-model_v4 | 35 | 342 | 120 | 472 | 0.584 |
0.9143 |
| AF-A0A077ZII9-F1-model_v4 | 29 | 342 | 38 | 432 | 0.559 |
0.822 |
| AF-P90920-F1-model_v4 | 35 | 342 | 115 | 479 | 0.5332 |
0.871 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4li2-assembly1.cif.gz_A | 36 | 342 | 65 | 418 | 0.7053 |
0.8758 |
| 3bz5-assembly1.cif.gz_A | 9 | 342 | 2 | 328 | 0.6714 |
0.8089 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P40197-F1-model_v4 | 1 | 342 | 6 | 422 | 0.6649 |
0.833 |
| AF-O08742-F1-model_v4 | 1 | 342 | 9 | 399 | 0.6599 |
0.8303 |
| AF-O08770-F1-model_v4 | 1 | 342 | 5 | 452 | 0.6473 |
0.8146 |
| AF-Q80X72-F1-model_v4 | 36 | 342 | 65 | 424 | 0.6328 |
0.8876 |
| AF-Q5R6B1-F1-model_v4 | 1 | 342 | 22 | 360 | 0.6154 |
0.7583 |
| AF-Q4R3P6-F1-model_v4 | 18 | 342 | 15 | 575 | 0.5936 |
0.7998 |
| AF-G3XA59-F1-model_v4 | 34 | 342 | 109 | 505 | 0.5855 |
0.854 |
| AF-Q9V780-F1-model_v4 | 1 | 342 | 1 | 422 | 0.5654 |
0.8106 |
| AF-P90920-F1-model_v4 | 35 | 342 | 115 | 479 | 0.5332 |
0.871 |
| AF-Q9BXB1-F1-model_v4 | 2 | 342 | 81 | 614 | 0.5279 |
0.7835 |