PROTEIN: HRGMv2_3900_132_3
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Protein File & Metadata
Source:
HRGMv2_3900_132_3.pdb
Genome ID:
Protein ID:
HRGMv2_3900_132_3
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Protein Sequence
MKRATASEIK IRGGRHDDVD AIMAVYDKAR KYMRRNGNLN QWINGYPSRE QVLADIDRGV 60 SFVGEDTLGE IVMAFAFIIG DDPTYAVIEG GRWLDATPYG TIHRLGSSGR YKGILELCVG 120 FCRKSIDNIR LDTHADNSTM LRGAERLGFT RCGIIYCDDG TPRVAFQQIF RP 172
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CYK9-F1-model_v4 | 9 | 171 | 1 | 164 | 0.8935 |
0.9379 |
| AF-A0A132PA73-F1-model_v4 | 9 | 171 | 1 | 170 | 0.8433 |
0.9083 |
| AF-Q0P7R6-F1-model_v4 | 7 | 172 | 2 | 174 | 0.8265 |
0.8882 |
| AF-Q2FYL4-F1-model_v4 | 10 | 172 | 1 | 169 | 0.8188 |
0.8816 |
| AF-Q9HUV0-F1-model_v4 | 5 | 171 | 1 | 150 | 0.7782 |
0.8576 |
| AF-Q58QH5-F1-model_v4 | 4 | 170 | 1 | 165 | 0.737 |
0.781 |
| AF-A0A0H3GVD6-F1-model_v4 | 1 | 171 | 6 | 154 | 0.7317 |
0.8272 |
| AF-A0A0H3GLV1-F1-model_v4 | 8 | 170 | 1 | 169 | 0.729 |
0.7924 |
| AF-K0EZR6-F1-model_v4 | 9 | 171 | 1 | 177 | 0.7264 |
0.8 |
| AF-K0F3Q7-F1-model_v4 | 7 | 172 | 9 | 172 | 0.7244 |
0.7884 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QQP97041.1 | GH108 | 1 | 170 | 199 | 359 | 0.5339 |
0.7794 |
| AF-A0A1Z4JVE6-F1-model_v4 | GT0 | 1 | 172 | 331 | 499 | 0.487 |
0.7502 |
| AF-C0QA13-F1-model_v4 | GT0 | 1 | 172 | 2 | 509 | 0.4853 |
0.7382 |
| AF-F2NJR4-F1-model_v4 | GT0 | 6 | 172 | 342 | 500 | 0.4789 |
0.7824 |
| A0A4V0Z4R3 | GT0 | 1 | 172 | 364 | 537 | 0.4698 |
0.7311 |
| AF-A0A4V0Z4R3-F1-model_v4 | GT0 | 1 | 172 | 364 | 537 | 0.4698 |
0.7311 |
| AF-A0A6P1KIU4-F1-model_v4 | GT0 | 5 | 172 | 365 | 547 | 0.4668 |
0.7398 |
| AF-A0A1D8U245-F1-model_v4 | GT0 | 6 | 172 | 346 | 507 | 0.4654 |
0.7472 |
| QWB99432.1 | GT0 | 5 | 172 | 328 | 484 | 0.4613 |
0.7524 |
| UGB46561.1 | GT0 | 5 | 172 | 365 | 530 | 0.4597 |
0.7311 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QQP97041.1 | GH108 | 1 | 170 | 199 | 359 | 0.5339 |
0.7794 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2pc1-assembly1.cif.gz_A | 6 | 172 | 4 | 173 | 0.8704 |
0.9195 |
| 2oh1-assembly3.cif.gz_C | 4 | 170 | 5 | 172 | 0.7331 |
0.7923 |
| 5icw-assembly1.cif.gz_B | 1 | 172 | 1 | 179 | 0.7196 |
0.7675 |
| 8osp-assembly2.cif.gz_C | 5 | 170 | 3 | 174 | 0.7177 |
0.7823 |
| 5icw-assembly3.cif.gz_D | 1 | 172 | 1 | 176 | 0.7147 |
0.7563 |
| 5icw-assembly3.cif.gz_C-3 | 1 | 171 | 2 | 176 | 0.714 |
0.7587 |
| 4r3k-assembly1.cif.gz_A | 4 | 170 | 1 | 157 | 0.7033 |
0.7672 |
| 6ag4-assembly1.cif.gz_A | 4 | 170 | 1 | 157 | 0.6982 |
0.7628 |
| 6ag5-assembly1.cif.gz_A | 4 | 170 | 1 | 157 | 0.6923 |
0.7572 |
| 1vhs-assembly2.cif.gz_B | 8 | 172 | 1 | 158 | 0.6869 |
0.7478 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O31513-F1-model_v4 | 5 | 172 | 11 | 180 | 0.7559 |
0.8191 |
| AF-P54951-F1-model_v4 | 7 | 172 | 1 | 163 | 0.7484 |
0.8047 |
| AF-O32075-F1-model_v4 | 8 | 172 | 1 | 166 | 0.7101 |
0.7725 |
| AF-I6YG32-F1-model_v4 | 1 | 172 | 1 | 157 | 0.7034 |
0.7697 |
| AF-P49855-F1-model_v4 | 6 | 172 | 9 | 172 | 0.7029 |
0.7668 |
| AF-O74311-F1-model_v4 | 7 | 171 | 1 | 150 | 0.6965 |
0.7776 |
| AF-Q976C3-F1-model_v4 | 2 | 170 | 6 | 167 | 0.6919 |
0.756 |
| AF-Q4JBG0-F1-model_v4 | 1 | 170 | 4 | 168 | 0.6902 |
0.7447 |
| AF-Q980R9-F1-model_v4 | 5 | 170 | 9 | 167 | 0.683 |
0.7585 |
| AF-P94482-F1-model_v4 | 6 | 172 | 5 | 170 | 0.674 |
0.7272 |