PROTEIN: HRGMv2_3898_17_32
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Protein File & Metadata
Source:
HRGMv2_3898_17_32.pdb
Genome ID:
Protein ID:
HRGMv2_3898_17_32
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Protein Sequence
MGHGPSPFSN NRLLVYKPWV PRRLRFWLIL MFAFFYQLSG GVYLAALSQM VGELSFLNED 60 VTMASYCSLI GLNMIFPVLF RWKFYFYSRQ MWFVSSVGSI VCAVAAPYST IPWVLWIVCL 120 FAGYFKMMGM FGCMSTVQLN ITPTRNYGVF FPVVYILVCG SIQISGLMTA YISYSFNWKY 180 VYLVIVGLML VIDGIVYFMM NHDHRGAPFI PLKGVDWTGH ILWVATCCIA AWIFNFGEHY 240 DWWDSREIWY ATWLFIVVFA LTLVESYYKK DPYISLKAFC YSTTWRVTFV LLGIAVLQAS 300 AHVLQPVFMN AVVGYDYFTI VNFNYPEIYG IIIGAVLTYF ALVRWKWRMK IFFFICFLLT 360 TFYIIASYFL IDLSTEAWLF YMPLFAFGAG EVMMESGATY MICCKIPFQH MFMNIAIIGF 420 ARCGVGTAAA GALIERLFVW TMNKNVMLTS SEMDNFNGIG ESWFGEYFTQ QNIMLAVKEC 480 FGYLALFGIL MMLMILLARF TPPVNRLVPK MSAAARWIRH PYSAPDPTLG 530
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GSP9-F1-model_v4 | 3 | 530 | 13 | 549 | 0.8144 |
0.8463 |
| AF-Q32DH7-F1-model_v4 | 5 | 502 | 5 | 503 | 0.8067 |
0.8596 |
| AF-Q5F680-F1-model_v4 | 7 | 500 | 1 | 497 | 0.8049 |
0.8574 |
| AF-P44927-F1-model_v4 | 10 | 500 | 7 | 503 | 0.7998 |
0.8624 |
| AF-P52600-F1-model_v4 | 9 | 501 | 6 | 504 | 0.7997 |
0.8607 |
| AF-Q9I4A2-F1-model_v4 | 6 | 502 | 3 | 502 | 0.7952 |
0.8406 |
| AF-A0A0H3GPJ5-F1-model_v4 | 4 | 503 | 1 | 467 | 0.7932 |
0.8655 |
| AF-A0A0H3GU91-F1-model_v4 | 4 | 502 | 1 | 499 | 0.7916 |
0.8421 |
| AF-Q8ZMK8-F1-model_v4 | 4 | 502 | 1 | 499 | 0.7911 |
0.8418 |
| AF-A0A0H3GNL5-F1-model_v4 | 4 | 502 | 6 | 516 | 0.7909 |
0.846 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 1 | 501 | 5 | 529 | 0.7273 |
0.8039 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 6 | 502 | 16 | 463 | 0.6478 |
0.749 |
| ARF89445.1 | GT1 | 1 | 500 | 256 | 949 | 0.6381 |
0.8718 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 11 | 500 | 31 | 516 | 0.598 |
0.8408 |
| AF-A0A8A3PDC7-F1-model_v4 | CE0 | 1 | 505 | 51 | 824 | 0.5498 |
0.7085 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 502 | 289 | 749 | 0.5482 |
0.7484 |
| AF-A0A1J0LIF2-F1-model_v4 | GH17 | 6 | 500 | 7 | 456 | 0.5467 |
0.7626 |
| A0A3C1RID2 | GH17 | 3 | 499 | 3 | 453 | 0.5429 |
0.7571 |
| AF-A0A4P6YE09-F1-model_v4 | GH17 | 23 | 500 | 1 | 441 | 0.5427 |
0.7666 |
| AF-A0A2K8X8V5-F1-model_v4 | GH17 | 3 | 501 | 1 | 452 | 0.5418 |
0.751 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 1 | 501 | 5 | 529 | 0.7273 |
0.8039 |
| A2S189 | GH3 | 1 | 503 | 1 | 408 | 0.6495 |
0.7586 |
| ARF89445.1 | GT1 | 1 | 500 | 256 | 949 | 0.6381 |
0.8718 |
| A0A387HHJ8 | GT1 | 11 | 500 | 31 | 516 | 0.598 |
0.8408 |
| A0A7H8RF34 | CBM24 | 1 | 502 | 289 | 749 | 0.5482 |
0.7484 |
| A0A3C1RID2 | GH17 | 3 | 499 | 3 | 453 | 0.5429 |
0.7571 |
| A0A9Q9RZ67 | GH78 | 2 | 499 | 708 | 1440 | 0.5286 |
0.8269 |
| A0A3S4KEY5 | GH36 | 1 | 503 | 224 | 706 | 0.525 |
0.6644 |
| S5VEU6 | CE14 | 6 | 410 | 12 | 402 | 0.5221 |
0.8399 |
| F9G000 | GH3 | 1 | 499 | 47 | 546 | 0.5141 |
0.7985 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 8 | 499 | 1 | 481 | 0.7616 |
0.8176 |
| 7y58-assembly1.cif.gz_A | 9 | 501 | 6 | 502 | 0.7576 |
0.8153 |
| 8pnl-assembly2.cif.gz_C | 8 | 499 | 1 | 484 | 0.7528 |
0.8066 |
| 7d5p-assembly2.cif.gz_B | 25 | 502 | 1 | 413 | 0.7264 |
0.8315 |
| 7d5p-assembly1.cif.gz_A | 23 | 502 | 1 | 408 | 0.724 |
0.8325 |
| 7d5q-assembly2.cif.gz_B | 25 | 502 | 1 | 411 | 0.7229 |
0.8289 |
| 7d5q-assembly1.cif.gz_A | 25 | 502 | 1 | 403 | 0.7173 |
0.8293 |
| 6kkl-assembly1.cif.gz_A | 20 | 503 | 1 | 370 | 0.7098 |
0.8509 |
| 8b1j-assembly1.cif.gz_A | 11 | 505 | 1 | 449 | 0.7073 |
0.7839 |
| 6kkj-assembly1.cif.gz_B | 22 | 502 | 1 | 357 | 0.7024 |
0.8516 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RQ29-F1-model_v4 | 5 | 500 | 2 | 497 | 0.8097 |
0.8594 |
| AF-P0AEJ1-F1-model_v4 | 4 | 501 | 1 | 500 | 0.8055 |
0.8583 |
| AF-P0AEJ0-F1-model_v4 | 4 | 501 | 1 | 500 | 0.804 |
0.8569 |
| AF-P0DPR7-F1-model_v4 | 6 | 500 | 4 | 508 | 0.8038 |
0.8611 |
| AF-P44927-F1-model_v4 | 10 | 500 | 7 | 503 | 0.7998 |
0.8624 |
| AF-P52600-F1-model_v4 | 9 | 501 | 6 | 504 | 0.7997 |
0.8607 |
| AF-P32369-F1-model_v4 | 6 | 499 | 3 | 468 | 0.7929 |
0.87 |
| AF-Q8Y9K8-F1-model_v4 | 3 | 499 | 3 | 467 | 0.7842 |
0.8571 |
| AF-O35018-F1-model_v4 | 4 | 499 | 7 | 472 | 0.7823 |
0.8602 |
| AF-Q92EE1-F1-model_v4 | 3 | 499 | 3 | 467 | 0.7816 |
0.8544 |