PROTEIN: HRGMv2_3886_61_8
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Protein File & Metadata
Source:
HRGMv2_3886_61_8.pdb
Genome ID:
Protein ID:
HRGMv2_3886_61_8
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Protein Sequence
MITDKIKFAP GFAKEDSKTF ASAGVEAKGI EPARIWRNIT NISVWPRFTD AITDIQFEDS 60 ADNDPHLFDK AQFYFDTATG GRVRCQVIYF EHTKKDRAGR VAIQGTVFNP DGKQINEVVF 120 EVMVGVPESE KTNKLDVEAA LSFKEEVPDA PSVNFGDMLE SALRALVTWS EKHD 174
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-U7PPF4-F1-model_v4 | 1 | 174 | 4 | 182 | 0.8273 |
0.8714 |
| AF-K0F8A4-F1-model_v4 | 14 | 173 | 12 | 168 | 0.706 |
0.7952 |
| AF-O49686-F1-model_v4 | 1 | 174 | 11 | 179 | 0.7006 |
0.7839 |
| AF-I1M1T4-F1-model_v4 | 1 | 174 | 10 | 177 | 0.6973 |
0.7754 |
| AF-Q9SSM7-F1-model_v4 | 1 | 174 | 31 | 209 | 0.6861 |
0.7753 |
| AF-K7WBY4-F1-model_v4 | 1 | 174 | 24 | 195 | 0.685 |
0.7761 |
| AF-Q9SSK5-F1-model_v4 | 14 | 174 | 4 | 158 | 0.6841 |
0.7647 |
| AF-Q9C7I3-F1-model_v4 | 11 | 174 | 1 | 151 | 0.6834 |
0.7664 |
| AF-O49304-F1-model_v4 | 14 | 174 | 7 | 160 | 0.6791 |
0.7682 |
| AF-C4J0W6-F1-model_v4 | 1 | 174 | 25 | 195 | 0.6776 |
0.7819 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4r7k-assembly1.cif.gz_D | 1 | 171 | 3 | 168 | 0.8299 |
0.8788 |
| 3kl1-assembly1.cif.gz_A | 1 | 174 | 7 | 176 | 0.7375 |
0.7897 |
| 3nr4-assembly2.cif.gz_C-2 | 1 | 174 | 8 | 174 | 0.7327 |
0.7945 |
| 3kl1-assembly1.cif.gz_B | 1 | 174 | 7 | 175 | 0.732 |
0.787 |
| 4jda-assembly1.cif.gz_A | 1 | 173 | 9 | 177 | 0.7296 |
0.7882 |
| 4dsb-assembly1.cif.gz_B | 1 | 172 | 6 | 174 | 0.7291 |
0.7817 |
| 3nj0-assembly2.cif.gz_C-2 | 1 | 174 | 8 | 176 | 0.7288 |
0.786 |
| 3nr4-assembly1.cif.gz_B | 1 | 174 | 8 | 174 | 0.7276 |
0.7894 |
| 3k3k-assembly2.cif.gz_A-2 | 1 | 174 | 11 | 179 | 0.7272 |
0.7986 |
| 3nmt-assembly1.cif.gz_A | 1 | 174 | 4 | 174 | 0.7265 |
0.7765 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O49686-F1-model_v4 | 1 | 174 | 11 | 179 | 0.7006 |
0.7839 |
| AF-O80992-F1-model_v4 | 1 | 174 | 16 | 185 | 0.6944 |
0.7715 |
| AF-Q9SSM7-F1-model_v4 | 1 | 174 | 31 | 209 | 0.6861 |
0.7753 |
| AF-Q9SSK5-F1-model_v4 | 14 | 174 | 4 | 158 | 0.6841 |
0.7647 |
| AF-Q9C7I3-F1-model_v4 | 11 | 174 | 1 | 151 | 0.6834 |
0.7664 |
| AF-Q6I5C3-F1-model_v4 | 1 | 174 | 32 | 202 | 0.6598 |
0.7591 |
| AF-Q8S8E3-F1-model_v4 | 1 | 174 | 42 | 212 | 0.6582 |
0.7647 |
| AF-Q941R6-F1-model_v4 | 15 | 174 | 18 | 171 | 0.6553 |
0.7621 |
| AF-P59082-F1-model_v4 | 15 | 174 | 17 | 167 | 0.651 |
0.7674 |
| AF-Q9SSK9-F1-model_v4 | 1 | 174 | 60 | 335 | 0.5165 |
0.6947 |